ggKbase home page

L1_008_000G1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_89_1
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(848..1147)
DNA (300bp) protein (100aa)
Putative mycothiol system anti-sigma-R factor n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEB0_9ACTO
Putative mycothiol system anti-sigma-R factor {ECO:0000313|EMBL:EDN81534.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_000G1_scaffold_89_2
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1144..1683)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Actinomyces sp. ICM39 RepID=J2YNB9_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
RNA polymerase sigma factor RpoE
L1_008_000G1_scaffold_89_3
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1975..2502
DNA (528bp) protein (176aa)
DoxX family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EF14_9ACTO
DoxX family protein {ECO:0000313|EMBL:EWC95140.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2499..3851
DNA (1353bp) protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z710_9ACTO
3-phosphoshikimate 1-carboxyvinyltransferase
L1_008_000G1_scaffold_89_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3851..4936
DNA (1086bp) protein (362aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Actinomyces sp. ICM39 RepID=J3EF19_9ACTO
ribosome small subunit-dependent GTPase A
L1_008_000G1_scaffold_89_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5037..5489
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KRA2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95145.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_89_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5584..6321)
DNA (738bp) protein (246aa)
Class I glutamine amidotransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4C4_9ACTO
Class I glutamine amidotransferase {ECO:0000313|EMBL:EWC95167.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
glutamine amidotransferase
L1_008_000G1_scaffold_89_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6342..7619
DNA (1278bp) protein (426aa)
Exonuclease SbcCD, D subunit n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEB8_9ACTO
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EWC95146.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
nuclease SbcCD, D subunit
L1_008_000G1_scaffold_89_9
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7616..10690
DNA (3075bp) protein (1025aa)
AAA domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J479_9ACTO
AAA domain protein {ECO:0000313|EMBL:EJN45306.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
putative exonuclease
L1_008_000G1_scaffold_89_10
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10712..11182)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Actinomyces odontolyticus RepID=A7BEC0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95165.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_89_11
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11185..12372)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEC1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81545.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L1_008_000G1_scaffold_89_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12369..12953)
DNA (585bp) protein (195aa)
SAF domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEC2_9ACTO
SAF domain protein {ECO:0000313|EMBL:EWC95179.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_89_13
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13150..13362
DNA (213bp) protein (71aa)
DNA binding domain protein, excisionase family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J484_9ACTO
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDN81547.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
DNA-binding protein
L1_008_000G1_scaffold_89_14
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13356..13916)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEC4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95143.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14052..14774
DNA (723bp) protein (241aa)
LysM domain protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX21_9ACTO
LysM domain protein {ECO:0000313|EMBL:EFF80472.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
L1_008_000G1_scaffold_89_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14771..15262
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72180.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
L1_008_000G1_scaffold_89_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15345..18191)
DNA (2847bp) protein (949aa)
Protein translocase subunit SecA n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4C9_9ACTO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
secA; IISP family type II (general) secretory pathway protein SecA
L1_008_000G1_scaffold_89_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18374..19018)
DNA (645bp) protein (215aa)
Ribosomal subunit interface protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZQ93_9ACTO
Ribosomal subunit interface protein {ECO:0000313|EMBL:EPD72182.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
raiA; putative ribosome-associated inhibitor protein Y
L1_008_000G1_scaffold_89_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19193..19909)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX17_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95163.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_89_20
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19945..21591)
DNA (1647bp) protein (549aa)
Putative lipoprotein LpqB n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX16_9ACTO
Putative lipoprotein LpqB {ECO:0000313|EMBL:EFF80467.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
lipoprotein LpqB
L1_008_000G1_scaffold_89_21
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21588..23207)
DNA (1620bp) protein (540aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX15_9ACTO
integral membrane sensor signal transduction histidine kinase
L1_008_000G1_scaffold_89_22
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23188..23871)
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED2_9ACTO
DNA-binding response regulator MtrA {ECO:0000313|EMBL:EWC95174.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
two component transcriptional regulator
L1_008_000G1_scaffold_89_23
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24014..25258
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED3_9ACTO
Putative membrane protein {ECO:0000313|EMBL:EWC95183.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_24
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25258..25890
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81558.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L1_008_000G1_scaffold_89_25
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25887..27038
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED5_9ACTO
PF14258 domain protein {ECO:0000313|EMBL:EWC95152.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_26
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27031..28182
DNA (1152bp) protein (384aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX10_9ACTO
ATPase, AAA family {ECO:0000313|EMBL:EWC95162.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ATPase AAA
L1_008_000G1_scaffold_89_27
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28190..29521
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED7_9ACTO
PF01882 family protein {ECO:0000313|EMBL:EWC95177.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29562..30554)
DNA (993bp) protein (331aa)
Membrane protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BED8_9ACTO
Putative membrane protein {ECO:0000313|EMBL:EWC95159.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_89_29
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30573..31403
DNA (831bp) protein (277aa)
RDD family protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX07_9ACTO
RDD family protein {ECO:0000313|EMBL:EFF80458.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
RDD domain-containing protein
L1_008_000G1_scaffold_89_30
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31407..31949)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEE0_9ACTO
PF12005 family protein {ECO:0000313|EMBL:EWC95166.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
Displaying items 1-30 of 119 in total

View Taxonomy