ggKbase home page

L1_008_000G1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_94_1
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173..409
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V0M3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26118.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
lipoprotein
L1_008_000G1_scaffold_94_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

776..2272
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=5 Tax=Bacteroides RepID=D2ES80_9BACE
L1_008_000G1_scaffold_94_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2315..3709
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HUA1_BACUN
L1_008_000G1_scaffold_94_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3819..4418
DNA (600bp) protein (200aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
3-isopropylmalate dehydratase, small subunit n=3 Tax=Bacteroides RepID=A7V0M6_BACUN
3-isopropylmalate dehydratase small subunit
L1_008_000G1_scaffold_94_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4408..5949
DNA (1542bp) protein (514aa)
(R)-citramalate synthase (EC:2.3.1.182)
HMGL-like protein n=6 Tax=Bacteroides RepID=A7V0M7_BACUN
HMGL-like protein {ECO:0000313|EMBL:EDO55025.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L1_008_000G1_scaffold_94_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5962..6219
DNA (258bp) protein (86aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V0M8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77253.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L1_008_000G1_scaffold_94_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6209..7270
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
leuB; putative 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=6 Tax=Bacteroides RepID=D2ES85_9BACE
L1_008_000G1_scaffold_94_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7557..8630
DNA (1074bp) protein (358aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HUA4_BACUN
L1_008_000G1_scaffold_94_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8646..9497
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HTT4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07442.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L1_008_000G1_scaffold_94_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9501..11312)
DNA (1812bp) protein (604aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KDS49739.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KDS49739.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EEK8_9BACE
L1_008_000G1_scaffold_94_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11594..12067
DNA (474bp) protein (158aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V0N5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO55033.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_94_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12190..14217
DNA (2028bp) protein (676aa)
peptidase 3 (EC:3.4.14.4)
Peptidase family M49 n=2 Tax=Bacteroides RepID=A7V0N6_BACUN
Peptidase family M49 {ECO:0000313|EMBL:EDO55034.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L1_008_000G1_scaffold_94_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14224..14898
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bacteroides uniformis RepID=I8ZGY5_BACUN
DNA alkylation repair enzyme family protein {ECO:0000313|EMBL:KDS49736.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L1_008_000G1_scaffold_94_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15026..15514
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=5 Tax=Bacteroides RepID=D2ES92_9BACE
Fur family transcriptional regulator, ferric uptake regulator {ECO:0000313|EMBL:EOS07447.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
ferric uptake regulator, Fur family
L1_008_000G1_scaffold_94_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15511..16782
DNA (1272bp) protein (424aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HTW3_BACUN
L1_008_000G1_scaffold_94_16
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16885..18189
DNA (1305bp) protein (435aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:EFA20821.1}; EC=3.2.1.51 {ECO:0000313|EMBL:EFA20821.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Uncharacterized protein n=6 Tax=Bacteroides RepID=R7EC73_9BACE
glycoside hydrolase 29 (alpha-L-fucosidase)
L1_008_000G1_scaffold_94_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18331..19026
DNA (696bp) protein (232aa)
Putative neutral zinc metallopeptidase n=3 Tax=Bacteroides RepID=A7V0P2_BACUN
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:EDO55040.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
peptidase membrane zinc metallopeptidase
L1_008_000G1_scaffold_94_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19132..20295)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V0P4_BACUN
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KDS49730.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
transglutaminase
L1_008_000G1_scaffold_94_19
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


20428..21789
DNA (1362bp) protein (454aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Bacteroides RepID=R7EB29_9BACE
L1_008_000G1_scaffold_94_20
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21825..22094
DNA (270bp) protein (90aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D2ES98_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD99914.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L1_008_000G1_scaffold_94_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22143..22904
DNA (762bp) protein (254aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides RepID=D2ES99_9BACE
4Fe-4S binding domain-containing protein {ECO:0000313|EMBL:EFV26123.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L1_008_000G1_scaffold_94_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22874..23728)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I247_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07455.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Predicted Na+-dependent transporter
L1_008_000G1_scaffold_94_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23912..24184
DNA (273bp) protein (91aa)
10 kDa chaperonin n=15 Tax=Bacteroides RepID=A7V0P9_BACUN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Chaperonin Cpn10
L1_008_000G1_scaffold_94_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24222..25859
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=3 Tax=Bacteria RepID=R9HTV0_BACUN
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
molecular chaperone GroEL
L1_008_000G1_scaffold_94_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26114..26332
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HTX5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07458.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L1_008_000G1_scaffold_94_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26488..27507
DNA (1020bp) protein (340aa)
L-threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HU77_BACUN
Threonine aldolase {ECO:0000313|EMBL:EOS07459.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L1_008_000G1_scaffold_94_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27679..30189)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I253_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07460.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
polysaccharide deacetylase
L1_008_000G1_scaffold_94_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30498..31466
DNA (969bp) protein (323aa)
DnaJ domain protein n=6 Tax=Bacteroides RepID=A7V0Q5_BACUN
DnaJ C protein {ECO:0000313|EMBL:EFV26129.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
molecular chaperone DnaJ
L1_008_000G1_scaffold_94_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31466..31777
DNA (312bp) protein (104aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V0Q6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO55054.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L1_008_000G1_scaffold_94_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31915..33621)
DNA (1707bp) protein (569aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=7 Tax=Bacteroides RepID=A7V0Q8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07463.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
acyl-CoA dehydrogenase
Displaying items 1-30 of 103 in total

View Taxonomy