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L1_008_000G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_97_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..936
DNA (936bp) protein (312aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK57_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83590.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_97_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

960..1766
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83589.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
O-Methyltransferase involved in polyketide biosynthesis
L1_008_000G1_scaffold_97_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1985..2947
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK55_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA83588.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, AraC family
L1_008_000G1_scaffold_97_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3074..3685
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83587.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative membrane proteinTn1549-like,CTn2-Orf24
L1_008_000G1_scaffold_97_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3682..4383
DNA (702bp) protein (234aa)
Cobalt transport protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK53_9CLOT
Cobalt transport protein {ECO:0000313|EMBL:EEA83586.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cobalt transport protein
L1_008_000G1_scaffold_97_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4394..5872
DNA (1479bp) protein (493aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK52_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83585.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter-like protein
L1_008_000G1_scaffold_97_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5875..7701
DNA (1827bp) protein (609aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK51_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83584.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_97_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7694..9427
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK50_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83583.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_97_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9504..10001
DNA (498bp) protein (166aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK49_9CLOT
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EEA83582.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mn-dependent transcriptional regulator
L1_008_000G1_scaffold_97_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11146..11451
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83609.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_97_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11581..12105
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23527.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cytoplasmic protein
L1_008_000G1_scaffold_97_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12102..12428
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83607.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_97_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12475..13416
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23529.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of unknown function (DUF1848).
L1_008_000G1_scaffold_97_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13441..15399
DNA (1959bp) protein (653aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium RepID=R6PJ41_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDC23530.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L1_008_000G1_scaffold_97_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15393..17165
DNA (1773bp) protein (591aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23531.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_97_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17349..17993
DNA (645bp) protein (215aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium RepID=B6FK27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23532.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
(4Fe-4S)-binding protein
L1_008_000G1_scaffold_97_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17947..18909
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGS7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA83637.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
osmoprotectant ABC transporter substrate-binding/permease
L1_008_000G1_scaffold_97_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18906..19217
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23534.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type transport system, glycinebetaine/carnitine/choline permease
L1_008_000G1_scaffold_97_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19229..20023
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FK23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23535.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glycine/betaine ABC transporter ATP-binding protein
L1_008_000G1_scaffold_97_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20160..20699
DNA (540bp) protein (180aa)
Rubrerythrin n=2 Tax=Clostridium RepID=B6FK22_9CLOT
Rubrerythrin {ECO:0000313|EMBL:EEA83634.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Rubrerythrin
L1_008_000G1_scaffold_97_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20891..22327
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
adenylosuccinate lyase (EC:4.3.2.2)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QNN6_9CLOT
L1_008_000G1_scaffold_97_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22342..23619
DNA (1278bp) protein (426aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium RepID=B6FK20_9CLOT
L1_008_000G1_scaffold_97_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23731..25197
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PS42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23539.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Fe-S oxidoreductase
L1_008_000G1_scaffold_97_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25388..26446
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23540.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_97_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26473..28650)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23541.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L1_008_000G1_scaffold_97_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28655..31180)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23542.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L1_008_000G1_scaffold_97_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31378..31971
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium RepID=B6FK15_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEA83627.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, TetR family
L1_008_000G1_scaffold_97_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32173..33009
DNA (837bp) protein (279aa)
Transcription antiterminator LicT n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK14_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:EEA83626.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
bglg family transcriptional antiterminator
L1_008_000G1_scaffold_97_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33080..35038
DNA (1959bp) protein (653aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EEA83625.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEA83625.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
PTS system, beta-glucoside-specific, IIABC component n=2 Tax=Clostridium RepID=B6FK13_9CLOT
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.5)
L1_008_000G1_scaffold_97_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35061..36512
DNA (1452bp) protein (484aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.21)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK12_9CLOT
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEA83624.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying items 1-30 of 123 in total

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