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L1_008_000G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_106_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

746..1441
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SIA6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92194.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000G1_scaffold_106_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1466..3820
DNA (2355bp) protein (785aa)
Sensor histidine kinase n=2 Tax=Clostridium symbiosum RepID=E7GSQ3_CLOSY
Sensor histidine kinase {ECO:0000313|EMBL:EGA92193.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Signal transduction histidine kinase
L1_008_000G1_scaffold_106_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3872..5284
DNA (1413bp) protein (471aa)
MBOAT family protein n=2 Tax=Clostridium symbiosum RepID=E9SIA4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92192.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
algI; alginate O-acetylation protein algI
L1_008_000G1_scaffold_106_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5303..6406
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIA3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73780.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
alginate O-acetyltransferase AlgJ
L1_008_000G1_scaffold_106_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6587..7441)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05123.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
N-acetyltransferase GCN5
L1_008_000G1_scaffold_106_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7602..8831)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIA1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73779.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_106_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8865..10253)
DNA (1389bp) protein (463aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=E7GSP8_CLOSY
MATE efflux family protein {ECO:0000313|EMBL:EGA92188.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_106_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10585..11340)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CX28_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92187.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_106_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11373..11762)
DNA (390bp) protein (130aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=U2D2M4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92186.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sodium/glutamate symporter
L1_008_000G1_scaffold_106_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11789..12979)
DNA (1191bp) protein (397aa)
amidohydrolase (EC:3.5.1.-)
Thermostable carboxypeptidase 1 n=4 Tax=Clostridium RepID=E7GSP5_CLOSY
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:EGA92185.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_106_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13586..15343
DNA (1758bp) protein (586aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=2 Tax=Clostridium symbiosum RepID=E7GSP4_CLOSY
L1_008_000G1_scaffold_106_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15430..16698
DNA (1269bp) protein (423aa)
Imidazolonepropionase {ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|SAAS:SAAS00083112};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=2 Tax=Clostridium symbiosum RepID=E7GSP3_CLOSY
L1_008_000G1_scaffold_106_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16689..17255
DNA (567bp) protein (189aa)
formiminotetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI94_CLOSY
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:ERI73771.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_000G1_scaffold_106_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17332..18210
DNA (879bp) protein (293aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=4 Tax=Clostridium RepID=E7GSP1_CLOSY
Glutamate formimidoyltransferase {ECO:0000313|EMBL:ERI73770.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_000G1_scaffold_106_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18333..18797)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI92_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92180.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_106_16
unknown

Not on your lists

comp(18784..18894)
DNA (111bp) protein (37aa)

This feature has no annotations

L1_008_000G1_scaffold_106_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18894..21800)
DNA (2907bp) protein (969aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridium symbiosum RepID=E9SI91_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92258.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
regulatory protein
L1_008_000G1_scaffold_106_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21951..22886)
DNA (936bp) protein (312aa)
Sensory box/GGDEF domain-containing protein n=2 Tax=Clostridium symbiosum RepID=E7GSN8_CLOSY
Sensory box/GGDEF domain-containing protein {ECO:0000313|EMBL:EGA92257.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
signaling protein
L1_008_000G1_scaffold_106_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23161..24681
DNA (1521bp) protein (507aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=3 Tax=Clostridium symbiosum RepID=E7GSN7_CLOSY
L1_008_000G1_scaffold_106_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24840..25979)
DNA (1140bp) protein (380aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=2 Tax=Clostridium symbiosum RepID=E9SI88_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92255.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_106_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26001..26849)
DNA (849bp) protein (283aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium RepID=E9SI87_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03988.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RpiR family transcriptional regulator
L1_008_000G1_scaffold_106_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27107..28066)
DNA (960bp) protein (320aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
4-phosphoerythronate dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI86_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03987.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_106_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28246..29544)
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter n=2 Tax=Clostridium symbiosum RepID=E7GSN3_CLOSY
TRAP dicarboxylate transporter {ECO:0000313|EMBL:EGA92252.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP dicarboxylate transporter subunit DctM
L1_008_000G1_scaffold_106_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29541..30071)
DNA (531bp) protein (177aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN2_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92251.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter permease
L1_008_000G1_scaffold_106_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30104..31162)
DNA (1059bp) protein (353aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN1_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92250.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein
L1_008_000G1_scaffold_106_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31178..32716)
DNA (1539bp) protein (513aa)
Xylulokinase (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI82_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03983.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_106_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32752..33594)
DNA (843bp) protein (281aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=3 Tax=Clostridium RepID=E9SI81_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92248.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_106_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33653..34690)
DNA (1038bp) protein (346aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI80_CLOSY
Sorbitol dehydrogenase {ECO:0000313|EMBL:EGA92247.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
alcohol dehydrogenase
L1_008_000G1_scaffold_106_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35020..40245)
DNA (5226bp) protein (1742aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03980.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_106_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40264..40719)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92245.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
Displaying items 1-30 of 107 in total

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