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L1_008_000G1_scaffold_116

Search features with annotation key words

Displaying items 61-90 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_116_61
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55794..60707)
DNA (4914bp) protein (1638aa)
SrtB family sortase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2E4_9FIRM
SrtB family sortase {ECO:0000313|EMBL:EGN48256.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sortase, SrtB family
L1_008_000G1_scaffold_116_62
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60747..61895)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48255.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_63
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61885..62124)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48254.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_64
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62143..64767)
DNA (2625bp) protein (875aa)
peptidase M23 n=1 Tax=Blautia producta RepID=UPI0003798F51
Peptidase, M23 family {ECO:0000313|EMBL:EET61327.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Membrane proteins related to metalloendopeptidases
L1_008_000G1_scaffold_116_65

Not on your lists

comp(64807..67287)
DNA (2481bp) protein (827aa)
Conjugal transfer protein n=1 Tax=human gut metagenome RepID=K1UG49_9ZZZZ
Conjugal transfer protein {ECO:0000313|EMBL:EKC78994.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
traE protein
L1_008_000G1_scaffold_116_66
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67626..68183)
DNA (558bp) protein (186aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48251.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_008_000G1_scaffold_116_67
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68183..68626)
DNA (444bp) protein (148aa)
stage V sporulation protein G n=1 Tax=Blautia producta RepID=UPI00037664A1
SpoVG {ECO:0000313|EMBL:EET61323.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Uncharacterized protein, involved in the regulation of septum location
L1_008_000G1_scaffold_116_68
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68668..69531)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=root RepID=A5Z4W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52014.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000G1_scaffold_116_69
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69538..69753)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C6LD87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81587.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_008_000G1_scaffold_116_70
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70000..71844)
DNA (1845bp) protein (615aa)
Type IV secretory pathway, VirD4 components n=2 Tax=root RepID=D4LTU3_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL24201.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_008_000G1_scaffold_116_71

Not on your lists

comp(71841..72311)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TVP3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC73918.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000G1_scaffold_116_72
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72349..73164)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41024.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_73
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73171..74265)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000380D9B2
Uncharacterized protein {ECO:0000313|EMBL:EGN41025.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_74
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74262..75083)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A2S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23657.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L1_008_000G1_scaffold_116_75
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75098..77128)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41028.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_76
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77158..78057)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61304.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L1_008_000G1_scaffold_116_77
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78057..78338)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61303.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_008_000G1_scaffold_116_78
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78352..79335)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41030.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000G1_scaffold_116_79
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79391..80263)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LTV0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24208.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_008_000G1_scaffold_116_80
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80290..80814)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20802.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_008_000G1_scaffold_116_81
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80908..81768)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MIH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY85071.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L1_008_000G1_scaffold_116_82
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81768..82643)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23435.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_116_83
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82588..83367)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23434.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L1_008_000G1_scaffold_116_84
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83528..83971)
DNA (444bp) protein (148aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FUT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23433.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_116_85
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83999..84289)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80220.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
arsC; protein ArsC
L1_008_000G1_scaffold_116_86
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84310..85323)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PYA4_9CLOT
Putative permease {ECO:0000313|EMBL:EEA80221.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permeases
L1_008_000G1_scaffold_116_87
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85428..85700)
DNA (273bp) protein (91aa)
Transcriptional regulator, ArsR family n=2 Tax=Clostridium RepID=B6FUU1_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEA80222.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ArsR family transcriptional regulator
L1_008_000G1_scaffold_116_88
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85846..86580
DNA (735bp) protein (245aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridium RepID=B6FUU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23429.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_116_89
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86598..87368)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=2 Tax=Clostridium RepID=B6FUU3_9CLOT
L1_008_000G1_scaffold_116_90
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87382..88038)
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R6QN99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23427.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying items 61-90 of 125 in total

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