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L1_008_000G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_116_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40..723
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80230.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_116_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

816..1943
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23463.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transposase for insertion sequence element IS801
L1_008_000G1_scaffold_116_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2152..3792)
DNA (1641bp) protein (547aa)
Na/Pi-cotransporter II-like protein n=2 Tax=Clostridium RepID=B6FUQ7_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EEA80233.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Na/Pi-cotransporter II-like protein
L1_008_000G1_scaffold_116_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3896..4252)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PYE4_9CLOT
Putative stage V sporulation protein AE {ECO:0000313|EMBL:EEA80234.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
stage V sporulation protein AE
L1_008_000G1_scaffold_116_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4266..5273)
DNA (1008bp) protein (336aa)
Stage V sporulation protein AD n=2 Tax=Clostridium RepID=B6FUQ9_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:EEA80235.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Stage V sporulation protein AD (SpoVAD).
L1_008_000G1_scaffold_116_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5270..5728)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PRT3_9CLOT
Putative stage V sporulation protein AC {ECO:0000313|EMBL:EEA80236.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
stage V sporulation AC, SpoVAC
L1_008_000G1_scaffold_116_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5742..6158)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80237.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_116_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6118..6783)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23457.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Stage V sporulation protein AA.
L1_008_000G1_scaffold_116_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6774..6941)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23456.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_116_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7042..7755)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=3 Tax=Clostridium RepID=B6FUR6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RNA polymerase sigma-F factor
L1_008_000G1_scaffold_116_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7734..8189)
DNA (456bp) protein (152aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=2 Tax=Clostridium RepID=B6FUR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23454.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_116_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8186..8500)
DNA (315bp) protein (105aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium RepID=B6FUR8_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
anti-anti-sigma factor
L1_008_000G1_scaffold_116_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8599..9939)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23452.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_116_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..10093)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23451.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_116_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10086..11390)
DNA (1305bp) protein (435aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Bifunctional protein FolC n=2 Tax=Clostridium RepID=B6FUS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23450.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_116_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11425..13626)
DNA (2202bp) protein (734aa)
Arylsulfatase {ECO:0000313|EMBL:EEA80203.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEA80203.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Arylsulfatase n=2 Tax=Clostridium RepID=B6FUS2_9CLOT
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_008_000G1_scaffold_116_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13665..16436)
DNA (2772bp) protein (924aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUS3_9CLOT
L1_008_000G1_scaffold_116_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16710..17357)
DNA (648bp) protein (216aa)
phosphatase (EC:3.1.3.18)
HAD hydrolase, family IA, variant 1 n=2 Tax=Clostridium RepID=B6FUS4_9CLOT
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EEA80205.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_116_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17375..18238)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23446.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_116_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18257..19267)
DNA (1011bp) protein (337aa)
L-asparaginase, type I {ECO:0000313|EMBL:EEA80207.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEA80207.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
asparaginase (EC:3.5.1.1)
L-asparaginase, type I n=2 Tax=Clostridium RepID=B6FUS6_9CLOT
L1_008_000G1_scaffold_116_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19359..20033)
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium RepID=B6FUS7_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEA80208.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulator, TetR family
L1_008_000G1_scaffold_116_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20132..22234
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80209.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_116_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22215..24470
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80210.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
X-X-X-Leu-X-X-Gly heptad repeats
L1_008_000G1_scaffold_116_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24638..25207)
DNA (570bp) protein (190aa)
Guanosine polyphosphate pyrophosphohydrolases/synthetases (EC:3.1.7.2)
HD domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUT0_9CLOT
HD domain protein {ECO:0000313|EMBL:EEA80211.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_116_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25401..25715)
DNA (315bp) protein (105aa)
Transcriptional regulator, ArsR family n=2 Tax=Clostridium RepID=B6FUT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23440.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator
L1_008_000G1_scaffold_116_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25779..26198)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23439.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted DNA-binding protein with PD1-like DNA-binding motif
L1_008_000G1_scaffold_116_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26213..26533)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23438.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted dehydrogenases and related proteins
L1_008_000G1_scaffold_116_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26472..27077)
DNA (606bp) protein (202aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridium RepID=B6FUT4_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEA80215.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted dehydrogenases and related proteins
L1_008_000G1_scaffold_116_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27074..27802)
DNA (729bp) protein (243aa)
Putative phage head-tail adaptor n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUT5_9CLOT
Putative phage head-tail adaptor {ECO:0000313|EMBL:EEA80216.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulators
L1_008_000G1_scaffold_116_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27871..28068)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80217.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
SIR2; NAD-dependent protein deacetylase, SIR2 family
Displaying items 1-30 of 125 in total

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