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L1_008_000G1_scaffold_116_10

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(7042..7755)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Clostridium RepID=B6FUR6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 460
  • Evalue 6.20e-127
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 460
  • Evalue 8.70e-127
RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 237.0
  • Bit_score: 345
  • Evalue 1.10e-92

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Taxonomy

Tyzzerella nexilis → Tyzzerella → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGACCACACAATCGCTTTGATCAGACAATCACACGATGGGGATGAAAAAGCGAGAGAACAATTAGTGGAGGAAAATATCGGTCTGATCTGGTGTATTGTAAAACGATTTTATGGAAGAGGTGCAGAGCCGGAGGACTTGTTCCAAATTGGAAGTATTGGTCTTCTGAAAGCAATTGATAAATTTGATATGACGTATGATGTCAAGTTTTCAACCTATGCGGTGCCGATGATATCCGGAGAGATTAAGCGCTTTTTGCGGGATGACGGAATGATCAAGGTGAGCAGATCTTTGAAAGAACTTTCATACAAAGCATATTTTGCAAAAGAAAAGCTACAGGAAAAGCTTGGAAGAGATCCAACTTTGGAAGAACTGGCAGAAACTATGGAAGTAGAAAAAGAAGAGCTTGTCATGGCGATGGAGTCGAGTGGTGAAGTGGAATCACTCCATAAACCGATTTACCAGAAAGATGGAAATGAAATTCAACTGATGGATAAATTAGAGGAGACAGGGGCACAGGAAGAAAAGGTGCTTAATCAGATGCTGCTTGCGCAGCTTTTGGAGGGGCTTGAAAAAGAAGAGCGCCAGTTGATCTATTTGCGCTATTTTGCAAATCAGACACAGTCGCAGGTGGGAAAGACACTTGGAATTTCTCAGGTTCAGGTGTCGAGACTGGAAAAAAAGATTTTGAAAAATTTGAGGCAGAAGGTTTAA
PROTEIN sequence
Length: 238
MDHTIALIRQSHDGDEKAREQLVEENIGLIWCIVKRFYGRGAEPEDLFQIGSIGLLKAIDKFDMTYDVKFSTYAVPMISGEIKRFLRDDGMIKVSRSLKELSYKAYFAKEKLQEKLGRDPTLEELAETMEVEKEELVMAMESSGEVESLHKPIYQKDGNEIQLMDKLEETGAQEEKVLNQMLLAQLLEGLEKEERQLIYLRYFANQTQSQVGKTLGISQVQVSRLEKKILKNLRQKV*