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L1_008_000G1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_125_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..291
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GHH2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98727.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_125_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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266..979
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9P2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73890.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000G1_scaffold_125_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1326..2039
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHG6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU98741.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulator of the LytR/AlgR family
L1_008_000G1_scaffold_125_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2036..3406
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GHG5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98740.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_125_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3687..4487
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98738.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_6
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4509..5264
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ARR4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57260.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_008_000G1_scaffold_125_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5330..5926
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7GHG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98736.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5954..6712
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98750.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6746..6931
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98749.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6969..7322
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98748.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7421..7792
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98747.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_125_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8134..8703)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56185.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_125_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9003..10361
DNA (1359bp) protein (453aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Roseburia intestinalis RepID=D4KS10_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL09662.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10480..11355)
DNA (876bp) protein (292aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS09_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL09661.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11881..13635
DNA (1755bp) protein (585aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS07_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL09659.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13637..15421
DNA (1785bp) protein (595aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS06_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL09658.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15588..17141)
DNA (1554bp) protein (518aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=2 Tax=Roseburia RepID=D4KWF5_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CDA56191.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_125_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17385..19724
DNA (2340bp) protein (780aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWF6_9FIRM
Alpha-glucosidases, family 31 of glycosyl hydrolases
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBL11696.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_125_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19724..21880
DNA (2157bp) protein (719aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B589_9FIRM
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CDA56194.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_125_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21887..24151
DNA (2265bp) protein (755aa)
Diguanylate cyclase (GGDEF) domain n=2 Tax=Roseburia RepID=R6AYV9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDA56195.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
diguanylate cyclase (GGDEF) domain
L1_008_000G1_scaffold_125_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24159..24515
DNA (357bp) protein (119aa)
Hpt domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWF9_9FIRM
Hpt domain.
Hpt domain {ECO:0000313|EMBL:CBL11699.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_125_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24521..25207
DNA (687bp) protein (229aa)
Phosphopantetheine--protein transferase domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI35_9FIRM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CDA56198.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Phosphopantetheinyl transferase
L1_008_000G1_scaffold_125_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25266..25769
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS00_9FIRM
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26657
DNA (873bp) protein (291aa)
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methylenetetrahydrofolate reductase n=4 Tax=Roseburia RepID=D4KRZ9_9FIRM
L1_008_000G1_scaffold_125_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26739..27215
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56201.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_125_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27267..28130
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BSC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56202.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_125_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28288..29196)
DNA (909bp) protein (303aa)
AhpC/TSA family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRZ7_9FIRM
AhpC/TSA family.
AhpC/TSA family {ECO:0000313|EMBL:CBL09649.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_125_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29245..30144)
DNA (900bp) protein (300aa)
4Fe-4S binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI29_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEU98520.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative iron-sulfur-binding membrane protein
L1_008_000G1_scaffold_125_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30412..31059
DNA (648bp) protein (216aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=4 Tax=Roseburia RepID=D4KRZ6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDA56205.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_125_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31056..32204
DNA (1149bp) protein (383aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7J5_9FIRM
Signal transduction histidine kinase
Displaying items 1-30 of 115 in total

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