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L1_008_000G1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_143_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35..931)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PL38_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16993.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted Na+-dependent transporter
L1_008_000G1_scaffold_143_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1055..2281
DNA (1227bp) protein (409aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UVG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16992.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_143_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2291..3184
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJG3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19793.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
L1_008_000G1_scaffold_143_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3536..4948
DNA (1413bp) protein (471aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bacteroides RepID=A5ZJG2_9BACE
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
chromosomal replication initiator protein DnaA
L1_008_000G1_scaffold_143_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5051..5794)
DNA (744bp) protein (248aa)
Nitroreductase family protein n=2 Tax=Bacteroides RepID=A5ZJG1_9BACE
Nitroreductase family protein {ECO:0000313|EMBL:EDM19791.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
oxidoreductase
L1_008_000G1_scaffold_143_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6079..8616
DNA (2538bp) protein (846aa)
Ribonucleoside-diphosphate reductase n=3 Tax=Bacteroides RepID=I9PL34_9BACE
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EIY16988.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
L1_008_000G1_scaffold_143_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8747..11428
DNA (2682bp) protein (894aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
Putative 4-alpha-glucanotransferase n=2 Tax=root RepID=A5ZJF9_9BACE
Putative 4-alpha-glucanotransferase {ECO:0000313|EMBL:EDM19789.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_143_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11439..11831
DNA (393bp) protein (131aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EDM19788.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EDM19788.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=2 Tax=Bacteroides RepID=A5ZJF8_9BACE
L1_008_000G1_scaffold_143_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11897..12418)
DNA (522bp) protein (174aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=3 Tax=Bacteroides RepID=A5ZJF7_9BACE
L1_008_000G1_scaffold_143_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12423..13505)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=3 Tax=root RepID=I9EAS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16984.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted glycosyltransferases
L1_008_000G1_scaffold_143_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13448..14383)
DNA (936bp) protein (312aa)
Lauroyl/myristoyl acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=2 Tax=Bacteroides caccae RepID=A5ZJF5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16983.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_143_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14386..15705)
DNA (1320bp) protein (440aa)
tRNA methylthiotransferase YqeV n=2 Tax=Bacteroides caccae RepID=A5ZJF4_9BACE
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EDM19784.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe-S oxidoreductase
L1_008_000G1_scaffold_143_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15816..17489
DNA (1674bp) protein (558aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKJ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74447.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_143_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17648..17857
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8US05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16980.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_143_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17943..18914)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAS1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16979.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Xylose isomerase-like TIM barrel.
L1_008_000G1_scaffold_143_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18942..19805)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19781.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Domain of Unknown Function (DUF1080).
L1_008_000G1_scaffold_143_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19853..21340)
DNA (1488bp) protein (496aa)
Tat pathway signal sequence domain protein n=3 Tax=Bacteroides RepID=A5ZJF0_9BACE
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EIY16977.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
dehydrogenase
L1_008_000G1_scaffold_143_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21352..22464)
DNA (1113bp) protein (371aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZJE9_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDM19779.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
oxidoreductase
L1_008_000G1_scaffold_143_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22697..24358)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74441.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
regulatory protein
L1_008_000G1_scaffold_143_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24436..24879)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAR7_9BACE
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L9P
L1_008_000G1_scaffold_143_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24894..25166)
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=9 Tax=Bacteroides RepID=A5ZJE6_9BACE
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
30S ribosomal protein S18
L1_008_000G1_scaffold_143_22
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(25169..25513)
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=4 Tax=Bacteroides RepID=A5ZJE5_9BACE
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
SSU ribosomal protein S6P
L1_008_000G1_scaffold_143_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25674..26120
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=4 Tax=Bacteroides RepID=A5ZJE4_9BACE
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDM19774.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
MarR family transcriptional regulator
L1_008_000G1_scaffold_143_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26261..26437
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJE3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM19773.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_143_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26516..27217)
DNA (702bp) protein (234aa)
Two-component system response regulator n=8 Tax=Bacteroides RepID=Q8A5S3_BACTN
two-component system response regulator
Transcriptional regulatory protein rprY {ECO:0000313|EMBL:EIY16969.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_143_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27219..28766)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJE0_9BACE
two-component system sensor histidine kinase
L1_008_000G1_scaffold_143_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29032..31188)
DNA (2157bp) protein (719aa)
Translation elongation factor G n=2 Tax=Bacteroides caccae RepID=A5ZJD9_9BACE
Translation elongation factor G {ECO:0000313|EMBL:EIY16967.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
fusA; elongation factor G
L1_008_000G1_scaffold_143_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31502..32632
DNA (1131bp) protein (377aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKI8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16966.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_143_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32652..33212
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I8URZ0_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ74273.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L1_008_000G1_scaffold_143_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33315..34205
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9EAQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74272.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
Displaying items 1-30 of 100 in total

View Taxonomy