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L1_008_000G1_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_149_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126..758)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J021_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(791..991)
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BSR5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57298.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1185..2225)
DNA (1041bp) protein (347aa)
ltaE; L-threonine aldolase (EC:4.1.2.5)
L-threonine aldolase, low-specificity n=3 Tax=Pseudomonas RepID=I2BQ90_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2316..3044
DNA (729bp) protein (243aa)
TraX family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BM99_PSEFL
TraX family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3281..4534
DNA (1254bp) protein (418aa)
glyA_2; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Serine hydroxymethyltransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J7T1_9PSED
L1_008_000G1_scaffold_149_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4557..5807
DNA (1251bp) protein (417aa)
soxB; sarcosine oxidase, beta subunit (EC:1.5.3.1)
Sarcosine oxidase, beta subunit {ECO:0000313|EMBL:EIK61659.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EIK61659.1};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Sarcosine oxidase, beta subunit, heterotetrameric n=6 Tax=Pseudomonas RepID=E2XZD4_PSEFL
L1_008_000G1_scaffold_149_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5823..6125
DNA (303bp) protein (101aa)
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1)
Sarcosine oxidase, delta subunit n=4 Tax=Pseudomonas RepID=I2BXE3_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6122..9139
DNA (3018bp) protein (1006aa)
soxA; sarcosine oxidase, alpha subunit (EC:1.5.3.1)
Sarcosine oxidase subunit alpha n=2 Tax=Pseudomonas RepID=S6HG55_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..9908
DNA (633bp) protein (211aa)
soxG; sarcosine oxidase, gamma subunit (EC:1.5.3.1)
SoxG protein {ECO:0000313|EMBL:AFJ59367.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AFJ59367.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Sarcosine oxidase, gamma subunit n=2 Tax=Pseudomonas RepID=I2BYN4_PSEFL
L1_008_000G1_scaffold_149_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10034..10891
DNA (858bp) protein (286aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;"
purU_2; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XZD0_PSEFL
L1_008_000G1_scaffold_149_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11075..12274
DNA (1200bp) protein (400aa)
fdhA; formaldehyde dehydrogenase (EC:1.2.1.46)
FdhA protein {ECO:0000313|EMBL:AFJ56528.1}; EC=1.2.1.46 {ECO:0000313|EMBL:AFJ56528.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Formaldehyde dehydrogenase, glutathione-independent n=2 Tax=Pseudomonas RepID=I2BQJ5_PSEFL
L1_008_000G1_scaffold_149_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12470..12928)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H958_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_13
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13065..13637
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KML6_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14123..15019)
DNA (897bp) protein (299aa)
Acyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BPY2_PSEFL
acyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AFJ56315.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15191..15691
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BPQ3_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56236.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15700..16368
DNA (669bp) protein (223aa)
DNA-binding response regulator CreB n=2 Tax=Pseudomonas RepID=S6HCF9_9PSED
creB; DNA-binding response regulator CreB
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16368..17807
DNA (1440bp) protein (480aa)
creC; sensor histidine kinase CreC (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Sensor histidine kinase CreC n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQS2_PSEFL
L1_008_000G1_scaffold_149_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17859..19208
DNA (1350bp) protein (450aa)
Inner membrane protein, CreD family n=3 Tax=Pseudomonas RepID=I2BYZ1_PSEFL
inner membrane protein, CreD family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19416..20045)
DNA (630bp) protein (210aa)
Glutathione S-transferase-like protein YibF n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BKM7_PSEFL
yibF; glutathione S-transferase
YibF protein {ECO:0000313|EMBL:AFJ54810.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..20389)
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BT81_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57464.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20386..21489)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J037_9PSED
PepSY-associated membrane protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21552..23981)
DNA (2430bp) protein (810aa)
TonB-dependent outermembrane ferrichrome receptor FhuA n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K2H7_PSEFL
TonB-dependent outermembrane ferrichrome receptor FhuA {ECO:0000313|EMBL:EIK58917.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
fhuA; TonB-dependent outermembrane ferrichrome receptor FhuA
L1_008_000G1_scaffold_149_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24189..25157)
DNA (969bp) protein (323aa)
Putative anti sigma factor n=1 Tax=Pseudomonas sp. CF150 RepID=S6KMM3_9PSED
sigma factor regulatory protein, FecR/PupR family
Uncharacterized protein {ECO:0000313|EMBL:AFJ57837.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25154..25537)
DNA (384bp) protein (128aa)
RNA polymerase sigma factor n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IMS7_9PSED
RNA polymerase sigma-70 factor, ECF family {ECO:0000313|EMBL:EIK63134.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
ECF subfamily RNA polymerase sigma-70 factor
L1_008_000G1_scaffold_149_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25827..26534)
DNA (708bp) protein (236aa)
Putative DNA poymerase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IYW6_9PSED
exonuclease
Uncharacterized protein {ECO:0000313|EMBL:AFJ58463.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_149_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26531..28492)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J041_9PSED
cyclic nucleotide-binding domain/CBS domain pair/putative nucleotidyltransferase domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28700..29146
DNA (447bp) protein (149aa)
Putative response regulator n=2 Tax=Pseudomonas RepID=S6H947_9PSED
response regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29306..31483)
DNA (2178bp) protein (726aa)
glcB; malate synthase G (EC:2.3.3.9)
Malate synthase G n=2 Tax=Pseudomonas RepID=S6HG32_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31804..32316
DNA (513bp) protein (171aa)
ACT domain protein n=4 Tax=Pseudomonas RepID=I2BLT1_PSEFL
ACT domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_149_30
unknown

Not on your lists

32348..32710
DNA (363bp) protein (121aa)

This feature has no annotations

Displaying items 1-30 of 105 in total

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