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L1_008_000G1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_156_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(136..2631)
DNA (2496bp) protein (832aa)
Excinuclease ATPase subunit n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS45_9FIRM
Excinuclease ATPase subunit
Excinuclease ATPase subunit {ECO:0000313|EMBL:CBL09697.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_156_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2615..2944)
DNA (330bp) protein (110aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030B0FE1
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF38912.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_156_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3467..5170)
DNA (1704bp) protein (568aa)
Predicted ATPase of the ABC class n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW79_9FIRM
Predicted ATPase of the ABC class {ECO:0000313|EMBL:CDA56133.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted ATPase of the ABC class
L1_008_000G1_scaffold_156_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5175..8531)
DNA (3357bp) protein (1119aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BAM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56131.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_156_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8506..9258)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS49_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09701.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_156_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9258..10721)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B528_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56129.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_156_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10824..12275)
DNA (1452bp) protein (484aa)
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS50_9FIRM
L1_008_000G1_scaffold_156_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12320..13807)
DNA (1488bp) protein (496aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3J9_9FIRM
ATPase family associated with various cellular activities (AAA).
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CBL14189.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13877..14650)
DNA (774bp) protein (258aa)
Na+-driven multidrug efflux pump n=3 Tax=Roseburia intestinalis RepID=D4L3J8_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL14188.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14841..16208)
DNA (1368bp) protein (456aa)
Endoglucanase A {ECO:0000313|EMBL:EEU99549.1}; EC=3.2.1.4 {ECO:0000313|EMBL:EEU99549.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Endoglucanase A n=2 Tax=root RepID=C7GF51_9FIRM
Endoglucanase
L1_008_000G1_scaffold_156_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16264..17376)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B525_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56124.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted glycosylase
L1_008_000G1_scaffold_156_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17487..18503)
DNA (1017bp) protein (339aa)
Transcriptional regulators n=4 Tax=root RepID=D4L3J5_9FIRM
Transcriptional regulators
Uncharacterized protein {ECO:0000313|EMBL:CDA56123.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18525..19169)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=root RepID=C7GF54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56121.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_156_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19333..20820)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=3 Tax=root RepID=C7GF55_9FIRM
ABC-type sugar transport system, periplasmic component
Uncharacterized protein {ECO:0000313|EMBL:CDA56120.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_15

Not on your lists

comp(20873..21841)
DNA (969bp) protein (323aa)
Uncharacterized protein n=4 Tax=root RepID=R6B519_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61814.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative ABC transporter, permease protein
L1_008_000G1_scaffold_156_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21858..22766)
DNA (909bp) protein (303aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=4 Tax=root RepID=D4L3J3_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Uncharacterized protein {ECO:0000313|EMBL:CDA56118.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22766..25342)
DNA (2577bp) protein (859aa)
Uncharacterized protein n=4 Tax=root RepID=R6BS64_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56117.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25358..25978)
DNA (621bp) protein (207aa)
Yip1 domain n=4 Tax=root RepID=D4L3J1_9FIRM
Yip1 domain.
Uncharacterized protein {ECO:0000313|EMBL:CDA56116.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25971..27449)
DNA (1479bp) protein (493aa)
Gluconolactonase n=3 Tax=root RepID=D4L3J0_9FIRM
Gluconolactonase
Uncharacterized protein {ECO:0000313|EMBL:CDA56115.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27465..28361)
DNA (897bp) protein (299aa)
Putative ABC transporter permease protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B514_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDA56114.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
lplC8; protein LplC
L1_008_000G1_scaffold_156_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28363..29295)
DNA (933bp) protein (311aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=4 Tax=root RepID=D4L3I9_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL14179.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29328..31268)
DNA (1941bp) protein (647aa)
ABC-type sugar transport system, periplasmic component n=3 Tax=Roseburia RepID=D4L3I8_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDA56111.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31470..32297)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZER7_9ZZZZ
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDA56111.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32839..33033)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99536.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_156_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33128..33280)
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=root RepID=C7GF68_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56110.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_156_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33337..36201)
DNA (2865bp) protein (955aa)
Beta-galactosidase/beta-glucuronidase n=2 Tax=root RepID=D4L3I6_9FIRM
Beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL14176.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36243..37553)
DNA (1311bp) protein (437aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3I5_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL14175.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37632..38651)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GF72_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14174.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38692..39624)
DNA (933bp) protein (311aa)
CobW/P47K family protein n=2 Tax=Roseburia intestinalis RepID=C7GF73_9FIRM
Putative GTPases (G3E family)
Putative GTPases (G3E family) {ECO:0000313|EMBL:CBL14173.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_156_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39792..41114)
DNA (1323bp) protein (441aa)
Predicted carboxypeptidase (EC:3.4.19.11)
Predicted carboxypeptidase {ECO:0000313|EMBL:CBL14172.1}; EC=3.4.19.11 {ECO:0000313|EMBL:CBL14172.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Predicted carboxypeptidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3I2_9FIRM
Displaying items 1-30 of 90 in total

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