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L1_008_000G1_scaffold_165

Search features with annotation key words

Displaying items 61-90 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_165_61
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68551..69312
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Clostridium RepID=B6FV79_9CLOT
L1_008_000G1_scaffold_165_62
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69326..70000
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=2 Tax=Clostridium RepID=B6FV78_9CLOT
L1_008_000G1_scaffold_165_63
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70147..72381
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22305.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_165_64
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72514..72873
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV75_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEA80093.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_165_65
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72897..74759
DNA (1863bp) protein (621aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEA80092.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEA80092.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV74_9CLOT
heavy metal translocating P-type ATPase
L1_008_000G1_scaffold_165_66
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74776..75300
DNA (525bp) protein (175aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV73_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEA80091.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Tetratricopeptide repeat.
L1_008_000G1_scaffold_165_67
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75310..76560
DNA (1251bp) protein (417aa)
GTPase HflX n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV72_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
GTP-binding proten HflX
L1_008_000G1_scaffold_165_68
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76557..77180
DNA (624bp) protein (208aa)
Putative rRNA methylase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV71_9CLOT
Putative rRNA methylase {ECO:0000313|EMBL:EEA80089.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L1_008_000G1_scaffold_165_69
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77062..77955)
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV70_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA80088.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_165_70
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78083..78940
DNA (858bp) protein (286aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Diaminopimelate epimerase n=2 Tax=Clostridium RepID=B6FV69_9CLOT
diaminopimelate epimerase
L1_008_000G1_scaffold_165_71
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79115..82519
DNA (3405bp) protein (1135aa)
ATP-dependent nuclease subunit B n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV68_9CLOT
ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EEA80086.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP-dependent nuclease subunit B
L1_008_000G1_scaffold_165_72
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82510..86163
DNA (3654bp) protein (1218aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV67_9CLOT
recombination helicase AddA, Firmicutes type
L1_008_000G1_scaffold_165_73
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86166..86429
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80084.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L1_008_000G1_scaffold_165_74
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86537..86860
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PN66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22294.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, PadR family
L1_008_000G1_scaffold_165_75
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86857..87486
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PD99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22293.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted membrane protein
L1_008_000G1_scaffold_165_76
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87486..88247
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80081.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function (DUF2807).
L1_008_000G1_scaffold_165_77
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88309..88509
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FV62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22291.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Small, acid-soluble spore proteins, alpha/beta type.
L1_008_000G1_scaffold_165_78
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88602..89282
DNA (681bp) protein (227aa)
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EEA80079.1}; EC=2.4.1.- {ECO:0000313|EMBL:EEA80079.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV61_9CLOT
Teichoic acid biosynthesis proteins
L1_008_000G1_scaffold_165_79
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89472..90560
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80078.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, CdaR family
L1_008_000G1_scaffold_165_80
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90578..91255
DNA (678bp) protein (226aa)
Cell division ATP-binding protein FtsE n=2 Tax=Clostridium RepID=B6FV59_9CLOT
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EEA80077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cell division ATP-binding protein FtsE
L1_008_000G1_scaffold_165_81
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91255..92166
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK02_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell division protein FtsX
L1_008_000G1_scaffold_165_82
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92175..93305
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22286.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Membrane-bound metallopeptidase
L1_008_000G1_scaffold_165_83
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93322..94512
DNA (1191bp) protein (397aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22285.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_165_84
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94602..95888
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Dihydroorotase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PN59_9CLOT
dihydroorotase
L1_008_000G1_scaffold_165_85
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95901..96827
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=2 Tax=Clostridium RepID=B6FJC9_9CLOT
L1_008_000G1_scaffold_165_86
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96840..97622
DNA (783bp) protein (261aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium RepID=B6FJC8_9CLOT
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L1_008_000G1_scaffold_165_87
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97622..98524
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUU2_9CLOT
dihydroorotate dehydrogenase 1B
L1_008_000G1_scaffold_165_88
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98554..98931
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22280.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein DUF4190
L1_008_000G1_scaffold_165_89
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98948..99871
DNA (924bp) protein (308aa)
Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B6FJC5_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA83859.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_165_90
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99970..100509
DNA (540bp) protein (180aa)
YbaK/proline--tRNA ligase associated domain protein n=2 Tax=Clostridium RepID=B6FJC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22277.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying items 61-90 of 100 in total

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