ggKbase home page

L1_008_000G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_165_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
Subtilisin family peptidase (EC:3.4.21.96)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PCR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22078.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_165_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

765..4520
DNA (3756bp) protein (1252aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVE0_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA80003.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_165_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4601..5884
DNA (1284bp) protein (428aa)
UPF0597 protein CLONEX_04128 n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80002.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
protein of unknown function DUF1063
L1_008_000G1_scaffold_165_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5890..6885
DNA (996bp) protein (332aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD8_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEA80001.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative oxidoreductase protein
L1_008_000G1_scaffold_165_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6887..8668
DNA (1782bp) protein (594aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD7_9CLOT
1,4-alpha-glucan-branching protein
L1_008_000G1_scaffold_165_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8788..9501
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD6_9CLOT
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EEA79999.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
IMP cyclohydrolase-like protein.
L1_008_000G1_scaffold_165_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9513..10688
DNA (1176bp) protein (392aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD5_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EEA79998.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_165_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10881..18701
DNA (7821bp) protein (2607aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEW3_9CLOT
L1_008_000G1_scaffold_165_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18881..20227
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Clostridium RepID=B6FVD2_9CLOT
L1_008_000G1_scaffold_165_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20651..21493)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22087.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_165_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21615..22919
DNA (1305bp) protein (435aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
enolase (EC:4.2.1.11)
Enolase n=2 Tax=Clostridium RepID=B6FVC9_9CLOT
L1_008_000G1_scaffold_165_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23034..23276
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=2 Tax=Clostridium RepID=B6FVC8_9CLOT
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EEA80051.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
protein translocase, SecG subunit
L1_008_000G1_scaffold_165_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23389..25557
DNA (2169bp) protein (723aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=2 Tax=Clostridium RepID=B6FVC7_9CLOT
L1_008_000G1_scaffold_165_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25523..25990
DNA (468bp) protein (156aa)
SsrA-binding protein n=2 Tax=Clostridium RepID=B6FVC6_9CLOT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
SmpB; tmRNA-binding protein
L1_008_000G1_scaffold_165_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26003..26236
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22092.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_165_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26250..26750
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80047.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_165_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26782..27249)
DNA (468bp) protein (156aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium RepID=B6FVC3_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEA80046.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ADP-ribose pyrophosphatase
L1_008_000G1_scaffold_165_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27408..28313
DNA (906bp) protein (302aa)
Putative membrane protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVC2_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EEA80045.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permease, DMT superfamily
L1_008_000G1_scaffold_165_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28323..28472)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23047.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_165_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28793..30154
DNA (1362bp) protein (454aa)
Amino acid carrier protein n=2 Tax=Clostridium RepID=B6FVC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23048.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
amino acid carrier protein
L1_008_000G1_scaffold_165_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30247..30858
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23049.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
arylsulfate sulfotransferase
L1_008_000G1_scaffold_165_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30833..31732
DNA (900bp) protein (300aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVB8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80041.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L1_008_000G1_scaffold_165_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31707..33647
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PX87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23051.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_165_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33701..34219)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QM86_9CLOT
L1_008_000G1_scaffold_165_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34314..34997)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23053.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_165_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34994..35269)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80037.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_165_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35547..35657)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_165_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35877..36821
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23054.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DMT superfamily permease
L1_008_000G1_scaffold_165_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36860..38626
DNA (1767bp) protein (589aa)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVB0_9CLOT
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80033.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cobalt transport protein ATP-binding subunit
L1_008_000G1_scaffold_165_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38640..39464
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=2 Tax=Clostridium RepID=B6FVA9_9CLOT
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
Displaying items 1-30 of 100 in total

View Taxonomy