ggKbase home page

L1_008_000G1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_170_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..114
-----------------
DNA (114bp)
protein (38aa)
Uncharacterized protein n=4 Tax=Roseburia intestinalis RepID=C7G7Y6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEV02092.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_170_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

350..811
-----------------
DNA (462bp)
protein (154aa)
Predicted membrane protein n=2 Tax=Roseburia intestinalis RepID=D4KMD5_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL08037.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_170_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

882..1859
-----------------
DNA (978bp)
protein (326aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEV02314.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEV02314.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Glycosyltransferases involved in cell wall biogenesis n=3 Tax=Roseburia RepID=D4KZ12_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L1_008_000G1_scaffold_170_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1868..2812
-----------------
DNA (945bp)
protein (315aa)
Glycosyltransferases involved in cell wall biogenesis n=4 Tax=Roseburia RepID=D4KMD7_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL12603.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2839..4947
-----------------
DNA (2109bp)
protein (703aa)
Listeria/Bacterioides repeat n=2 Tax=Roseburia RepID=D4KZ14_9FIRM
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CDA54141.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Listeria/Bacterioides repeat
L1_008_000G1_scaffold_170_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5083..6183
-----------------
DNA (1101bp)
protein (367aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G7A7_9FIRM
Protein of unknown function (DUF3048).
Uncharacterized protein {ECO:0000313|EMBL:CBL12605.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6339..7058
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G7A6_9FIRM
hypothetical protein
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:CDA54139.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7062..8195
-----------------
DNA (1134bp)
protein (378aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54138.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_170_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8185..9222
-----------------
DNA (1038bp)
protein (346aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12608.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9256..10290
-----------------
DNA (1035bp)
protein (345aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ19_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL12609.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10503..11549)
-----------------
DNA (1047bp)
protein (349aa)
Acyltransferase family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ21_9FIRM
Acyltransferase family.
Acyltransferase family {ECO:0000313|EMBL:CBL12611.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11573..12592)
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G7A1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54128.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12610..13563)
-----------------
DNA (954bp)
protein (318aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G7A0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12613.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13744..15354
-----------------
DNA (1611bp)
protein (537aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL12614.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
hypothetical protein
L1_008_000G1_scaffold_170_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15366..16226
-----------------
DNA (861bp)
protein (287aa)
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ25_9FIRM
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases {ECO:0000313|EMBL:CBL12615.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16256..18016
-----------------
DNA (1761bp)
protein (587aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KME8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL08050.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
hypothetical protein
L1_008_000G1_scaffold_170_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17991..19529
-----------------
DNA (1539bp)
protein (513aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G796_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL08051.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
hypothetical protein
L1_008_000G1_scaffold_170_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19544..20422
-----------------
DNA (879bp)
protein (293aa)
Glycosyl transferase family 11 n=3 Tax=Roseburia RepID=D4KMF0_9FIRM
Glycosyl transferase family 11.
Glycosyl transferase family 11 {ECO:0000313|EMBL:CDA54116.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20436..22181
-----------------
DNA (1746bp)
protein (582aa)
ABC-type multidrug transport system, ATPase and permease components n=3 Tax=Roseburia intestinalis RepID=D4KMF1_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL08053.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_170_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22178..23017
-----------------
DNA (840bp)
protein (280aa)
Nodulation protein Z (NodZ) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ29_9FIRM
Nodulation protein Z (NodZ).
Nodulation protein Z (NodZ) {ECO:0000313|EMBL:CBL12619.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23078..23806
-----------------
DNA (729bp)
protein (243aa)
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family (EC:2.4.1.187 2.4.1.-)
Bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family n=2 Tax=Roseburia RepID=D4KMF3_9FIRM
Bacterial polymer biosynthesis proteins WecB/TagA/CpsF family {ECO:0000313|EMBL:CDA54110.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23913..25787
-----------------
DNA (1875bp)
protein (625aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CBL12621.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CBL12621.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=3 Tax=Roseburia RepID=D4KZ31_9FIRM
L1_008_000G1_scaffold_170_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25790..26818
-----------------
DNA (1029bp)
protein (343aa)
Fucose 4-O-acetylase and related acetyltransferases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMF5_9FIRM
Fucose 4-O-acetylase and related acetyltransferases
Fucose 4-O-acetylase and related acetyltransferases {ECO:0000313|EMBL:CBL08057.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_170_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26990..27868)
-----------------
DNA (879bp)
protein (293aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ32_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL12622.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_170_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27997..29031
-----------------
DNA (1035bp)
protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=2 Tax=Roseburia RepID=C7G787_9FIRM
L1_008_000G1_scaffold_170_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29136..30077
-----------------
DNA (942bp)
protein (314aa)
Nucleoside-diphosphate-sugar epimerases (EC:1.1.1.271)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
GDP-L-fucose synthase n=3 Tax=Roseburia RepID=D4KMF9_9FIRM
L1_008_000G1_scaffold_170_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30100..31437
-----------------
DNA (1338bp)
protein (446aa)
Mannose-1-phosphate guanylyltransferase (EC:5.3.1.8)
Mannose-1-phosphate guanylyltransferase n=2 Tax=Roseburia RepID=D4KZ34_9FIRM
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:CDA54103.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31669..32043
-----------------
DNA (375bp)
protein (125aa)
Predicted transcriptional regulator n=4 Tax=Roseburia RepID=D4KMG1_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CDA54102.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_170_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32030..33442
-----------------
DNA (1413bp)
protein (471aa)
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMG2_9FIRM
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CBL08064.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_170_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33584..34507)
-----------------
DNA (924bp)
protein (308aa)
Predicted hydrolase (Metallo-beta-lactamase superfamily) n=2 Tax=Roseburia intestinalis RepID=D4KMG3_9FIRM
Predicted hydrolase (metallo-beta-lactamase superfamily)
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEV02285.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Displaying items 1-30 of 95 in total

View Taxonomy