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L1_008_000G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_183_1
unknown

Not on your lists

1..186
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000G1_scaffold_183_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

344..1177
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24040.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_183_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1232..4969
DNA (3738bp) protein (1246aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24046.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_183_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..6460)
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSV6_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EEA80907.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
amino acid carrier protein
L1_008_000G1_scaffold_183_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6725..8014
DNA (1290bp) protein (430aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Clostridium RepID=B6FSV5_9CLOT
L1_008_000G1_scaffold_183_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8252..8809
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24060.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF1393).
L1_008_000G1_scaffold_183_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8859..9503
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24063.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_183_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9500..10348
DNA (849bp) protein (283aa)
thymidylate synthase (EC:2.1.1.45)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PKL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24065.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_183_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10360..10851
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIB1_9CLOT
L1_008_000G1_scaffold_183_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10865..11755
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PKL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24070.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000G1_scaffold_183_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11752..11997)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24072.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_183_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12138..12983
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24074.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_183_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13144..14871
DNA (1728bp) protein (576aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Clostridium RepID=B6FSU5_9CLOT
L1_008_000G1_scaffold_183_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14886..15395
DNA (510bp) protein (170aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EEA80895.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EEA80895.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridium RepID=B6FSU4_9CLOT
L1_008_000G1_scaffold_183_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15514..16539
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Clostridium RepID=B6FSU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24077.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_183_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16590..17921)
DNA (1332bp) protein (444aa)
Magnesium transporter n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSU2_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mg2+ transporter (mgtE)
L1_008_000G1_scaffold_183_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18397..19152
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24079.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000G1_scaffold_183_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19155..20033
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Clostridium RepID=B6FSU0_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Disulfide bond chaperones of the HSP33 family
L1_008_000G1_scaffold_183_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20055..21974
DNA (1920bp) protein (640aa)
NAD+ synthase {ECO:0000313|EMBL:EEA80890.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EEA80890.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST9_9CLOT
L1_008_000G1_scaffold_183_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22045..22698)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80889.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_183_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22822..24522)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80888.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted ATPase of the ABC class
L1_008_000G1_scaffold_183_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24790..27111
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24084.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cna protein B-type domain.
L1_008_000G1_scaffold_183_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27054..28958
DNA (1905bp) protein (635aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST5_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEA80886.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Cna protein B-type domain.
L1_008_000G1_scaffold_183_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28978..29802
DNA (825bp) protein (275aa)
Sortase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST4_9CLOT
Sortase family protein {ECO:0000313|EMBL:EEA80885.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LPXTG-site transpeptidase (sortase) family protein
L1_008_000G1_scaffold_183_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29781..30458
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80884.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_183_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30535..31809
DNA (1275bp) protein (425aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST2_9CLOT
L1_008_000G1_scaffold_183_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31809..32300
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Clostridium RepID=B6FST1_9CLOT
L1_008_000G1_scaffold_183_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32403..33695
DNA (1293bp) protein (431aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST0_9CLOT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EEA80881.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Na+/H+ antiporter
L1_008_000G1_scaffold_183_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33800..35287
DNA (1488bp) protein (496aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QQ84_9CLOT
Threonine synthase {ECO:0000313|EMBL:CDC24092.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_183_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35705..37309
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Clostridium RepID=B6FSS6_9CLOT
Displaying items 1-30 of 81 in total

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