ggKbase home page

L1_008_000G1_scaffold_185

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_185_1
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154..441)
DNA (288bp) protein (96aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ15_CLOSY
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOS77613.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L1_008_000G1_scaffold_185_2
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(749..1072)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ14_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFD05430.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
L1_008_000G1_scaffold_185_3
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1084..3042)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ13_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFD05415.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
hypothetical protein
L1_008_000G1_scaffold_185_4
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3053..4663)
DNA (1611bp) protein (537aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EFD05414.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EFD05414.1};; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ12_CLOSY
DNA-cytosine methyltransferase
L1_008_000G1_scaffold_185_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4676..6757)
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ11_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHO26936.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L1_008_000G1_scaffold_185_6
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6779..7711)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ10_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFD05419.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
hypothetical protein
L1_008_000G1_scaffold_185_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7711..10458)
DNA (2748bp) protein (916aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ09_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHO26938.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Z1 domain-containing protein
L1_008_000G1_scaffold_185_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10451..11917)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ08_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHO26939.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
putative ATPase
L1_008_000G1_scaffold_185_9
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11965..12153)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ07_CLOSY
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFD05411.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
hypothetical protein
L1_008_000G1_scaffold_185_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12163..12447)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40516.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_008_000G1_scaffold_185_11
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12589..12855)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ06_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFV00617.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
putative transcriptional regulator
L1_008_000G1_scaffold_185_12
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12893..14737)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ05_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFV00618.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_008_000G1_scaffold_185_13
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14734..15192)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ04_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFV00619.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_008_000G1_scaffold_185_14
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15173..16144)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ03_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFV00620.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_008_000G1_scaffold_185_15
unknown

Not on your lists

16201..16392
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000G1_scaffold_185_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16533..17051
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ02_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFR38698.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L1_008_000G1_scaffold_185_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17342..17656
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ01_CLOSY
DNA ligase {ECO:0000313|EMBL:KGJ52468.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L1_008_000G1_scaffold_185_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17658..18788
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ00_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHO26946.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L1_008_000G1_scaffold_185_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18789..19361
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:KGJ52466.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L1_008_000G1_scaffold_185_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19377..19565
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ8_CLOSY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18475.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000G1_scaffold_185_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19632..19817
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:KGJ52464.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L1_008_000G1_scaffold_185_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19872..21812
DNA (1941bp) protein (647aa)
Putative DNA-directed DNA polymerase {ECO:0000313|EMBL:EFR38715.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR38715.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DNA polymerase I-3'-5' exonuclease and polymerase domains (EC:2.7.7.7)
Putative DNA-directed DNA polymerase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ6_CLOSY
L1_008_000G1_scaffold_185_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21964..22383
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFR38676.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L1_008_000G1_scaffold_185_24
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22387..22719
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFE46507.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_185_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22719..24992
DNA (2274bp) protein (758aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ3_CLOSY
Phage/plasmid primase, P4 family domain-containing protein {ECO:0000313|EMBL:KGJ52460.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
phage/plasmid DNA primase
L1_008_000G1_scaffold_185_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25132..25413
DNA (282bp) protein (94aa)
VRR-NUC domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ2_CLOSY
VRR-NUC domain protein {ECO:0000313|EMBL:EQJ61823.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_008_000G1_scaffold_185_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25394..26737
DNA (1344bp) protein (448aa)
SNF2 family N-terminal domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ1_CLOSY
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGJ52458.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
SNF2 domain-containing protein
L1_008_000G1_scaffold_185_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26807..27241
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPZ0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:KGJ52457.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L1_008_000G1_scaffold_185_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27356..27715
DNA (360bp) protein (120aa)
HNH endonuclease domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPY9_CLOSY
HNH endonuclease {ECO:0000313|EMBL:KGJ52456.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
HNH endonuclease
L1_008_000G1_scaffold_185_30
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27827..28381
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPY8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHO26958.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
Displaying items 1-30 of 100 in total

View Taxonomy