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L1_008_000G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_200_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(434..1819)
DNA (1386bp) protein (462aa)
DNA repair protein radA n=3 Tax=Roseburia RepID=D4KKP8_9FIRM
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_200_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2259..5330)
DNA (3072bp) protein (1024aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL07449.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
hypothetical protein
L1_008_000G1_scaffold_200_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5366..5782)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKP7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07449.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_200_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5941..6351)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G8T3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07448.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_200_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6463..8910)
DNA (2448bp) protein (816aa)
ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKP5_9FIRM
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CDA56731.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ATPases with chaperone activity, ATP-binding subunit
L1_008_000G1_scaffold_200_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8933..10309)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01763.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_200_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10379..11272)
DNA (894bp) protein (298aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Radical SAM domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8T6_9FIRM
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins {ECO:0000313|EMBL:CDA56735.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11377..12618
DNA (1242bp) protein (414aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
6-phosphofructokinase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUZ5_9FIRM
L1_008_000G1_scaffold_200_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12593..13519)
DNA (927bp) protein (309aa)
Esterase/lipase n=4 Tax=Roseburia RepID=D4KUZ4_9FIRM
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CDA56737.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13555..14220)
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8T9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56739.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14213..15511)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56740.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_200_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15787..16536
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56741.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_200_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16558..17400
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01770.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_200_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17489..18730)
DNA (1242bp) protein (414aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL11180.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL11180.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Serine hydroxymethyltransferase n=2 Tax=Roseburia intestinalis RepID=D4KKN6_9FIRM
L1_008_000G1_scaffold_200_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18870..19148)
DNA (279bp) protein (93aa)
Predicted membrane protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKN5_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL07437.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_200_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19334..21493)
DNA (2160bp) protein (720aa)
Protein translocase subunit secF/protein translocase subunit secD n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BU09_9FIRM
Protein translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:CDA56747.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
protein translocase subunit secF/protein translocase subunit secD
L1_008_000G1_scaffold_200_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21519..22892)
DNA (1374bp) protein (458aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=Roseburia RepID=C7G8U6_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EEV01774.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
arylsulfatase regulator
L1_008_000G1_scaffold_200_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23179..23367)
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B0M6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07435.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_200_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23467..24858)
DNA (1392bp) protein (464aa)
Uracil-xanthine permease n=3 Tax=Roseburia intestinalis RepID=D4KKN2_9FIRM
uracil-xanthine permease
Uracil-xanthine permease {ECO:0000313|EMBL:CBL11176.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_200_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25001..25393)
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8X6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56752.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25512..26420)
DNA (909bp) protein (303aa)
Galactose mutarotase and related enzymes n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B745_9FIRM
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CDA56754.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Galactose mutarotase and related enzymes
L1_008_000G1_scaffold_200_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26511..27164)
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=3 Tax=Roseburia RepID=D4KUY3_9FIRM
channel protein, hemolysin III family
Channel protein, hemolysin III family {ECO:0000313|EMBL:CBL11173.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_200_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27429..28820)
DNA (1392bp) protein (464aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Asparagine--tRNA ligase n=3 Tax=Roseburia RepID=D4KUY2_9FIRM
L1_008_000G1_scaffold_200_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28875..30158)
DNA (1284bp) protein (428aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUY1_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_200_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30298..30591
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8Y4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56759.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30611..31357)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B0N4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56760.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31385..32668)
DNA (1284bp) protein (428aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=4 Tax=Roseburia RepID=D4KKM4_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDA56761.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32686..33018)
DNA (333bp) protein (111aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=3 Tax=Roseburia RepID=D4KKM3_9FIRM
Predicted branched-chain amino acid permeases (azaleucine resistance)
Predicted branched-chain amino acid permeases (Azaleucine resistance) {ECO:0000313|EMBL:CDA56762.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_200_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33008..33769)
DNA (762bp) protein (254aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKM2_9FIRM
Predicted branched-chain amino acid permease (azaleucine resistance)
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CBL07424.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_200_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33931..35025
DNA (1095bp) protein (365aa)
Putative ATP synthase F1, delta subunit n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8Z0_9FIRM
Putative ATP synthase F1, delta subunit {ECO:0000313|EMBL:EEV01714.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Displaying items 1-30 of 78 in total

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