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L1_008_000G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_241_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..207)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6ZC50_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET18459.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_241_2
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(254..502)
DNA (249bp) protein (83aa)
N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Odoribacter RepID=H1DFW2_9PORP
N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:EHP48785.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
sugar isomerase (SIS)
L1_008_000G1_scaffold_241_3
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(540..2768)
DNA (2229bp) protein (743aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DFW3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48786.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
alpha-N-acetylglucosaminidase
L1_008_000G1_scaffold_241_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2791..5025)
DNA (2235bp) protein (745aa)
Alpha-N-acetylglucosaminidase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSN3_PEDHD
alpha-N-acetylglucosaminidase
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:ACU05596.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
L1_008_000G1_scaffold_241_5
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5143..6360)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UYG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80804.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
hypothetical protein
L1_008_000G1_scaffold_241_6
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6399..8204)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UR54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80803.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
RagB/SusD domain-containing protein
L1_008_000G1_scaffold_241_7
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8213..11566)
DNA (3354bp) protein (1118aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5VJA3_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ80802.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
TonB-dependent receptor plug
L1_008_000G1_scaffold_241_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11738..12952)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YUB5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17802.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
anti-sigma factor
L1_008_000G1_scaffold_241_9
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13028..13627)
DNA (600bp) protein (200aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XQD0_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY52262.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
sigma-70 family RNA polymerase sigma factor
L1_008_000G1_scaffold_241_10
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13952..14299)
DNA (348bp) protein (116aa)
Transposase, IS116/IS110/IS902 family n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CEU4_9BACE
Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:EDV05082.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
transposase, IS116/IS110/IS902 family
L1_008_000G1_scaffold_241_11
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14670..15128)
DNA (459bp) protein (153aa)
Site-specific recombinase XerD n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E1H9_9BACE
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD96729.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
Site-specific recombinase XerD
L1_008_000G1_scaffold_241_12
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15450..15755)
DNA (306bp) protein (102aa)
Site-specific recombinase XerD n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E1H9_9BACE
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD96729.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
Site-specific recombinase XerD
L1_008_000G1_scaffold_241_13
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16162..17496
DNA (1335bp) protein (445aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVV0_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EFA20790.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
outer membrane efflux protein
L1_008_000G1_scaffold_241_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17570..18667
DNA (1098bp) protein (366aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVU9_9BACE
Auxiliary transport protein, membrane fusion protein (MFP) family protein {ECO:0000313|EMBL:EFA20789.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Multidrug resistance efflux pump
L1_008_000G1_scaffold_241_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18774..20414
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UXW2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO56192.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L1_008_000G1_scaffold_241_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20452..21318
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HQK8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS06297.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transcriptional regulator, AraC family
L1_008_000G1_scaffold_241_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21325..22764)
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides uniformis RepID=A7UXV9_BACUN
L1_008_000G1_scaffold_241_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22785..23906)
DNA (1122bp) protein (374aa)
Osmosensitive K+ channel His kinase sensor domain protein n=6 Tax=Bacteroides RepID=A7UXV8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76672.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD
L1_008_000G1_scaffold_241_19
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24019..24774)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVU4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20784.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_008_000G1_scaffold_241_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24921..25493)
DNA (573bp) protein (191aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Potassium-transporting ATPase C chain n=6 Tax=Bacteroides RepID=D2EVU3_9BACE
potassium-transporting ATPase subunit C
L1_008_000G1_scaffold_241_21
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25506..27554)
DNA (2049bp) protein (683aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
kdpB; putative potassium-transporting ATPase B chain (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=4 Tax=Bacteroides RepID=D2EVU2_9BACE
L1_008_000G1_scaffold_241_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27585..29306)
DNA (1722bp) protein (574aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=6 Tax=root RepID=A7UXV4_BACUN
L1_008_000G1_scaffold_241_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29776..31209)
DNA (1434bp) protein (478aa)
Sigma-54 interaction domain protein n=7 Tax=Bacteroides RepID=A7UXV2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76678.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L1_008_000G1_scaffold_241_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31433..32767
DNA (1335bp) protein (445aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative aspartate kinase (EC:2.7.2.4)
Aspartokinase n=2 Tax=Bacteroides RepID=A7UXV0_BACUN
L1_008_000G1_scaffold_241_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32764..33555)
DNA (792bp) protein (264aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7UXU9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO56179.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L1_008_000G1_scaffold_241_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33574..34761)
DNA (1188bp) protein (396aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Cellobiose 2-epimerase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V843_9BACE
N-acylglucosamine 2-epimerase
L1_008_000G1_scaffold_241_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34786..36180)
DNA (1395bp) protein (465aa)
Transporter, major facilitator family protein n=6 Tax=Bacteroides RepID=D2EVT5_9BACE
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EIY76682.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
sugar (glycoside-Pentoside-Hexuronide) transporter
L1_008_000G1_scaffold_241_28
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36198..37370)
DNA (1173bp) protein (391aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=4 Tax=root RepID=A7UYI3_BACUN
glycosidase related protein
L1_008_000G1_scaffold_241_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37393..38508)
DNA (1116bp) protein (372aa)
Mannan endo-1,4-beta-mannosidase (EC:3.2.1.78)
Glycosyl hydrolase family 26 n=4 Tax=Bacteroides RepID=E5V840_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76684.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L1_008_000G1_scaffold_241_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38640..40100)
DNA (1461bp) protein (487aa)
WD40-like protein n=4 Tax=Bacteroides RepID=A7UYI6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76685.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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