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L1_008_000G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_255_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1230..4556)
DNA (3327bp) protein (1109aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5M2_BIFDB
L1_008_000G1_scaffold_255_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4940..6394)
DNA (1455bp) protein (485aa)
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EFM42393.1}; EC=2.7.1.- {ECO:0000313|EMBL:EFM42393.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Glycoside/pentoside/hexuronide transporter n=2 Tax=Bifidobacterium dentium RepID=E0Q558_9BIFI
lacS; galactoside symporter
L1_008_000G1_scaffold_255_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6716..9826
DNA (3111bp) protein (1037aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
lacZ1; beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=2 Tax=Bifidobacterium dentium RepID=E0Q557_9BIFI
L1_008_000G1_scaffold_255_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9850..10863)
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q556_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO95691.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_255_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10912..12147)
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q555_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM42390.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraJ-like protein
L1_008_000G1_scaffold_255_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12304..13296
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=E0Q554_9BIFI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM42389.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_255_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13792..15228)
DNA (1437bp) protein (479aa)
MFS transporter, SP family n=2 Tax=Bifidobacterium dentium RepID=E0Q552_9BIFI
MFS transporter, SP family {ECO:0000313|EMBL:EFM42387.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar transporter
L1_008_000G1_scaffold_255_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15415..16482)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q551_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42386.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_255_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16484..17386)
DNA (903bp) protein (301aa)
Kinase, PfkB family n=2 Tax=Bifidobacterium dentium RepID=E0Q550_9BIFI
Kinase, PfkB family {ECO:0000313|EMBL:EFM42385.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
pfkB family carbohydrate kinase
L1_008_000G1_scaffold_255_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17467..18156)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q549_9BIFI
PF07385 family protein {ECO:0000313|EMBL:ETO95724.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC-type sugar transport system, auxiliary component
L1_008_000G1_scaffold_255_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18476..19228
DNA (753bp) protein (251aa)
Transcriptional regulator, DeoR family n=2 Tax=Bifidobacterium dentium RepID=E0Q548_9BIFI
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFM42383.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DeoR faimly transcriptional regulator
L1_008_000G1_scaffold_255_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19368..20075
DNA (708bp) protein (236aa)
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EFM42382.1}; EC=5.1.3.1 {ECO:0000313|EMBL:EFM42382.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Putative ribulose-phosphate 3-epimerase n=2 Tax=Bifidobacterium dentium RepID=E0Q547_9BIFI
L1_008_000G1_scaffold_255_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20133..20699
DNA (567bp) protein (189aa)
Putative 6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:EFM42381.1}; EC=5.3.-.- {ECO:0000313|EMBL:EFM42381.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Putative 6-phospho 3-hexuloisomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q546_9BIFI
6-phospho 3-hexuloisomerase
L1_008_000G1_scaffold_255_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20931..23036)
DNA (2106bp) protein (702aa)
ABC transporter ATP-binding protein (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q545_9BIFI
ABC transporter transmembrane region {ECO:0000313|EMBL:ETO95759.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_255_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23052..24872)
DNA (1821bp) protein (607aa)
ABC transporter ATP-binding protein (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q544_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM42379.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_255_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24869..25441)
DNA (573bp) protein (191aa)
Transcriptional regulator, MarR family n=2 Tax=Bifidobacterium dentium RepID=E0Q543_9BIFI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFM42378.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MarR-type transcriptional regulator
L1_008_000G1_scaffold_255_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25702..26349)
DNA (648bp) protein (216aa)
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFM42377.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EFM42377.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
maa; maltose O-acetyltransferase (EC:2.3.1.18)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Bifidobacterium dentium RepID=E0Q542_9BIFI
L1_008_000G1_scaffold_255_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26523..28769)
DNA (2247bp) protein (749aa)
bgl4; beta-glucosidase (EC:3.2.1.37)
Bgl4 Beta-glucosidase {ECO:0000313|EMBL:ADB10249.1}; EC=3.2.1.37 {ECO:0000313|EMBL:ADB10249.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Bgl4 Beta-glucosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q5N4_BIFDB
L1_008_000G1_scaffold_255_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28958..29536
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=4 Tax=Bifidobacterium dentium RepID=D2Q5N5_BIFDB
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETO95683.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_255_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30067..31104)
DNA (1038bp) protein (346aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q539_9BIFI
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFM42374.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_255_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31219..32481)
DNA (1263bp) protein (421aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q538_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM42373.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MFS superfamily permease
L1_008_000G1_scaffold_255_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32593..33468)
DNA (876bp) protein (292aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFM42372.1}; EC=1.1.1.125 {ECO:0000313|EMBL:EFM42372.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q537_9BIFI
L1_008_000G1_scaffold_255_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33570..34451
DNA (882bp) protein (294aa)
Transcriptional regulator, MerR family n=2 Tax=Bifidobacterium dentium RepID=D2Q5P0_BIFDB
MerR family transcriptional regulator
MerR HTH family regulatory protein {ECO:0000313|EMBL:ETO95687.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_255_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34654..35103)
DNA (450bp) protein (150aa)
ArgG Argininosuccinate synthase n=4 Tax=Bifidobacterium dentium RepID=D2Q5P1_BIFDB
araG; argininosuccinate synthase
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27573.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_255_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35278..36732)
DNA (1455bp) protein (485aa)
Lincomycin resistance protein LmrB n=2 Tax=Bifidobacterium dentium RepID=E0Q534_9BIFI
Lincomycin resistance protein LmrB {ECO:0000313|EMBL:EFM42369.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
multidrug resistance protein B
L1_008_000G1_scaffold_255_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36804..37382)
DNA (579bp) protein (193aa)
Transcriptional regulator, MarR family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NDG3_9BIFI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFM42368.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Transcriptional regulator
L1_008_000G1_scaffold_255_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37571..38938)
DNA (1368bp) protein (456aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q532_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM42367.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
lacS; galactoside symporter
L1_008_000G1_scaffold_255_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39017..40606)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6K1_9BIFI
Alpha-L-rhamnosidase domain protein {ECO:0000313|EMBL:ADB10260.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
alpha-L-rhamnosidase
L1_008_000G1_scaffold_255_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40871..41575)
DNA (705bp) protein (235aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=E0Q530_9BIFI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFM42365.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
TetR family transcriptional regulator
L1_008_000G1_scaffold_255_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41807..43081
DNA (1275bp) protein (425aa)
ScrT Sucrose transporter n=4 Tax=Bifidobacterium dentium RepID=D2Q5P7_BIFDB
scrT; sucrose transporter
ScrT Sucrose transporter {ECO:0000313|EMBL:ADB10262.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 1-30 of 73 in total

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