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L1_008_000G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_260_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..745
DNA (744bp) protein (248aa)
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAZ9_9FIRM
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily {ECO:0000313|EMBL:CDA25957.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_008_000G1_scaffold_260_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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771..2993
DNA (2223bp) protein (741aa)
Predicted phosphatase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWP9_9FIRM
Predicted phosphatase {ECO:0000313|EMBL:CDA25956.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L1_008_000G1_scaffold_260_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3053..3922
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGE8_9FIRM
L1_008_000G1_scaffold_260_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3919..4440
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YMT1_9FIRM
L1_008_000G1_scaffold_260_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4443..5093
DNA (651bp) protein (217aa)
Predicted integral membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEQ9_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CDA25953.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted integral membrane protein
L1_008_000G1_scaffold_260_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5248..6255
DNA (1008bp) protein (336aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAZ4_9FIRM
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CDA25952.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Bacterial Ig-like domain (group 2).
L1_008_000G1_scaffold_260_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6323..8416)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25951.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
methyl-accepting chemotaxis protein
L1_008_000G1_scaffold_260_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8636..9184
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25950.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
AbrB family transcriptional regulator
L1_008_000G1_scaffold_260_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9430..11604
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25948.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
fibrinogen and keratin-10 binding surface anchored protein
L1_008_000G1_scaffold_260_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11621..11815
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25947.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11966..14326
DNA (2361bp) protein (787aa)
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (Candidate murein polymerase) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWP0_9FIRM
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (Candidate murein polymerase) {ECO:0000313|EMBL:CDA25946.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
penicillin-binding protein, 1A family
L1_008_000G1_scaffold_260_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14363..15370
DNA (1008bp) protein (336aa)
glucokinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25945.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15450..16196)
DNA (747bp) protein (249aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YMS0_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
L1_008_000G1_scaffold_260_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16343..16762
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25943.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16875..17114
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25942.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17184..18746
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25941.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptidoglycan-binding LysM
L1_008_000G1_scaffold_260_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18804..19964
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25940.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20170..21402
DNA (1233bp) protein (411aa)
NLP/P60 family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YMR5_9FIRM
NLP/P60 family {ECO:0000313|EMBL:CDA25939.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
NLP/P60 family
L1_008_000G1_scaffold_260_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21405..22103
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25938.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22125..23000
DNA (876bp) protein (292aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAX9_9FIRM
L1_008_000G1_scaffold_260_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23070..23636
DNA (567bp) protein (189aa)
HD domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWN2_9FIRM
HD domain protein {ECO:0000313|EMBL:CDA25936.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23651..24934
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25935.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24972..27749
DNA (2778bp) protein (926aa)
Translation elongation factor G n=1 Tax=Roseburia sp. CAG:18 RepID=R5USL2_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:CCZ78719.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
translation elongation factor G
L1_008_000G1_scaffold_260_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27844..29037
DNA (1194bp) protein (398aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK92_9FIRM
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CCZ78718.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
aspartate aminotransferase
L1_008_000G1_scaffold_260_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29121..29402
DNA (282bp) protein (94aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatases n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBG7_9FIRM
Acylphosphatases {ECO:0000313|EMBL:CDA24230.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29406..30149
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24231.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30344..30649
DNA (306bp) protein (102aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHK0_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA24234.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_260_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30696..33272
DNA (2577bp) protein (859aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBH3_9FIRM
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CDA24235.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33296..34318
DNA (1023bp) protein (341aa)
celA; cellulase CelA (EC:3.2.1.4)
Cellulase CelA n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRY4_9FIRM
Cellulase CelA {ECO:0000313|EMBL:CDA24236.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_260_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34469..34729
DNA (261bp) protein (87aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5X1_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDA24237.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
sporulation transcriptional regulator SpoIIID
Displaying items 1-30 of 87 in total

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