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L1_008_000G1_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_266_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..481)
DNA (480bp) protein (160aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Release factor glutamine methyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E055_BIFBR
hemK; Peptide release factor-glutamine N5-methyltransferase
L1_008_000G1_scaffold_266_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(624..1712)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=6 Tax=Bifidobacterium breve RepID=F6C6P3_BIFBA
prfA; Bacterial Peptide Chain Release Factor 1 (RF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_266_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1822..2034)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=26 Tax=Bifidobacterium RepID=RL31_BIFLD
rpmE2; LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_000G1_scaffold_266_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2324..2935
DNA (612bp) protein (204aa)
Multidrug resistance protein B n=3 Tax=Bifidobacterium breve RepID=F9Y2S1_BIFBU
Multidrug resistance protein B
Uncharacterized protein {ECO:0000313|EMBL:EPD75818.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_266_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3036..3827)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2S2_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96155.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_000G1_scaffold_266_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4348..4767)
DNA (420bp) protein (140aa)
Peptide deformylase n=2 Tax=Bifidobacterium breve RepID=S2ZN54_BIFBR
Peptide deformylase
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_266_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4826..5674)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHC6_BIFBR
dkg; 2,5-diketo-D-gluconic acid reductase
Uncharacterized protein {ECO:0000313|EMBL:EPD75821.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_266_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5747..5941)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00031F6309
Uncharacterized protein {ECO:0000313|EMBL:EFE88683.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
MFS family major facilitator transporter
L1_008_000G1_scaffold_266_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6107..6397)
DNA (291bp) protein (97aa)
Transcriptional regulator, MarR family n=5 Tax=Bifidobacterium breve RepID=F6C6Q1_BIFBA
iron dependent repressor, N-terminal DNA-binding domain protein
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFE88682.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_266_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6832..7782)
DNA (951bp) protein (317aa)
NagC family transcriptional regulator n=1 Tax=Bifidobacterium breve RepID=UPI0002F8245C
Glucokinase/Xylose repressor
Uncharacterized protein {ECO:0000313|EMBL:EPD75823.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_266_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8318..10057)
DNA (1740bp) protein (580aa)
multidrug transporter n=1 Tax=Bifidobacterium breve RepID=UPI0003684564
putative membrane spanning protein, MFS member
Putative membrane spanning protein, MFS member {ECO:0000313|EMBL:AHJ21652.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_266_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10658..12337
DNA (1680bp) protein (560aa)
ChvD family ATP-binding cassette protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZN58_BIFBR
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EPD75825.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ChvD family ATP-binding protein
L1_008_000G1_scaffold_266_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12554..13459
DNA (906bp) protein (302aa)
tesB; Acyl-CoA thioesterase (EC:3.1.2.-)
Acyl-CoA thioesterase {ECO:0000313|EMBL:ABE96162.1}; EC=3.1.2.- {ECO:0000313|EMBL:ABE96162.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Acyl-CoA thioesterase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2S9_BIFBU
L1_008_000G1_scaffold_266_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13500..14027)
DNA (528bp) protein (176aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2T0_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE96163.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_000G1_scaffold_266_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14122..15732)
DNA (1611bp) protein (537aa)
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2T1_BIFBU
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABE96164.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
sulD; Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
L1_008_000G1_scaffold_266_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15850..16725)
DNA (876bp) protein (292aa)
dihydropteroate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002D3D174
Dihydropteroate synthase
Dihydropteroate synthase {ECO:0000313|EMBL:EPD75829.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_266_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16923..17582)
DNA (660bp) protein (220aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
GTP cyclohydrolase 1 n=5 Tax=Bifidobacterium breve RepID=F6C6Q9_BIFBA
folE; GTP cyclohydrolase I
L1_008_000G1_scaffold_266_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17679..19775)
DNA (2097bp) protein (699aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Bifidobacterium breve RepID=F6C6R0_BIFBA
Cell division protein ftsH
L1_008_000G1_scaffold_266_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19772..20335)
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFE88668.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFE88668.1};; Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:BAR00574.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypoxanthine phosphoribosyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C6R1_BIFBA
Hypoxanthine-guanine phosphoribosyltransferase
L1_008_000G1_scaffold_266_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20322..21473)
DNA (1152bp) protein (384aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTC2_BIFBR
tRNA(Ile)-lysidine synthetase TilS
L1_008_000G1_scaffold_266_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21509..23005)
DNA (1497bp) protein (499aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bifidobacterium breve RepID=UPI0002F7E78C
putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain
Putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain {ECO:0000313|EMBL:AHJ21662.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_266_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23030..24700)
DNA (1671bp) protein (557aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI000303796D
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88665.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_266_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24700..25782)
DNA (1083bp) protein (361aa)
ABC transporter n=1 Tax=Bifidobacterium breve RepID=UPI0002D5500E
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF27907.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_266_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26215..27438)
DNA (1224bp) protein (408aa)
N-acetylglucosaminyltransferase (EC:2.4.1.-)
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:ABE96173.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABE96173.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
N-acetylglucosaminyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2U0_BIFBU
L1_008_000G1_scaffold_266_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27438..29030)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BR17_BIFBR
Putative transport protein {ECO:0000313|EMBL:BAR00580.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE88662.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical membrane spanning protein with DUF20 domain
L1_008_000G1_scaffold_266_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29108..30034
DNA (927bp) protein (309aa)
glycosyltransferase, group 2 family protein (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:AEF27176.1}; EC=2.4.-.- {ECO:0000313|EMBL:AEF27176.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bifidobacterium breve RepID=F6C6R8_BIFBA
L1_008_000G1_scaffold_266_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30171..31322)
DNA (1152bp) protein (384aa)
Lactaldehyde reductase n=5 Tax=Bifidobacterium breve RepID=F6C6R9_BIFBA
Lactaldehyde reductase
Lactaldehyde reductase {ECO:0000313|EMBL:AHJ21668.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_266_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31672..32976
DNA (1305bp) protein (435aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Bifidobacterium breve RepID=F6C6S0_BIFBA
Cyclopropane-fatty-acyl-phospholipid synthase
Uncharacterized protein {ECO:0000313|EMBL:EPD75841.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_266_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33448..34386
DNA (939bp) protein (313aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BR13_BIFBR
tRNA (m(7)G46) methyltransferase
L1_008_000G1_scaffold_266_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34491..34967)
DNA (477bp) protein (159aa)
Xre transcriptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2U6_BIFBU
Xre transcriptional regulator
Xre transcriptional regulator {ECO:0000313|EMBL:AEJ80226.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying items 1-30 of 74 in total

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