ggKbase home page

L1_008_000G1_scaffold_275

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_275_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(99..968)
DNA (870bp) protein (290aa)
ParB-like partition protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R436_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EHM90285.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ParB-like partition proteins
L1_008_000G1_scaffold_275_2
unknown

Not on your lists

1198..1587
DNA (390bp) protein (130aa)

This feature has no annotations

L1_008_000G1_scaffold_275_3
unknown

Not on your lists

1565..1930
DNA (366bp) protein (122aa)

This feature has no annotations

L1_008_000G1_scaffold_275_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1917..3122
DNA (1206bp) protein (402aa)
Phage integrase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NNT9_CLODI
Phage integrase family protein {ECO:0000313|EMBL:EQJ56977.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
integrase family protein
L1_008_000G1_scaffold_275_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3211..4866)
DNA (1656bp) protein (552aa)
DAK2 domain fusion protein YloV n=4 Tax=Erysipelotrichaceae RepID=B0N2X3_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EHM91954.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DAK2 domain-containing protein YloV
L1_008_000G1_scaffold_275_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4879..5235)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48221.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_008_000G1_scaffold_275_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5465..5650
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=5 Tax=Erysipelotrichaceae RepID=B0N2X1_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rpmB; 50S ribosomal protein L28
L1_008_000G1_scaffold_275_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5850..7208
DNA (1359bp) protein (453aa)
Glycosyl hydrolase, family 1 n=3 Tax=Erysipelotrichaceae RepID=B0N2X0_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS19397.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
beta-glucosidase
L1_008_000G1_scaffold_275_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7300..8118
DNA (819bp) protein (273aa)
YihY family protein n=2 Tax=Erysipelotrichaceae RepID=H1AGT6_9FIRM
YihY family protein {ECO:0000313|EMBL:EHQ48218.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ribonuclease bn
L1_008_000G1_scaffold_275_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8154..9278)
DNA (1125bp) protein (375aa)
Chaperone protein DnaJ n=3 Tax=Erysipelotrichaceae RepID=B0N2W8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaJ; chaperone protein DnaJ
L1_008_000G1_scaffold_275_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9339..11156)
DNA (1818bp) protein (606aa)
Chaperone protein DnaK n=5 Tax=Erysipelotrichaceae RepID=B0N2W7_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaK; chaperone protein DnaK
L1_008_000G1_scaffold_275_12
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11174..11716)
DNA (543bp) protein (181aa)
Protein GrpE n=4 Tax=Coprobacillus RepID=C3RKE5_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
grpE; heat shock protein GrpE
L1_008_000G1_scaffold_275_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11728..12768)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=5 Tax=Erysipelotrichaceae RepID=B0N2W5_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hrcA; heat-inducible transcription repressor
L1_008_000G1_scaffold_275_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12955..13578)
DNA (624bp) protein (208aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RKE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34237.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
flavin reductase domain-containing protein
L1_008_000G1_scaffold_275_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13699..14793)
DNA (1095bp) protein (365aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9R1A1_9FIRM
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCZ34238.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_275_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14783..15997)
DNA (1215bp) protein (405aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=5 Tax=Erysipelotrichaceae RepID=B0N2W2_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CCZ34239.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_275_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16006..16953)
DNA (948bp) protein (316aa)
DNA polymerase III, delta subunit n=5 Tax=Erysipelotrichaceae RepID=B0N2W1_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCZ34240.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
yqeN; putative protein YqeN
L1_008_000G1_scaffold_275_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16989..18995)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R198_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91941.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DNA internalization-related competence protein ComEC/Rec2
L1_008_000G1_scaffold_275_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18986..19486)
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2V9_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EHM91940.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
competence protein ComEA
L1_008_000G1_scaffold_275_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19479..20468)
DNA (990bp) protein (330aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Erysipelotrichaceae RepID=B0N2V8_9FIRM
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
L1_008_000G1_scaffold_275_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20479..21045)
DNA (567bp) protein (189aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Erysipelotrichaceae RepID=B0N2V7_9FIRM
L1_008_000G1_scaffold_275_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21172..22455)
DNA (1284bp) protein (428aa)
GTPase Obg n=2 Tax=Coprobacillus RepID=G9R194_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
GTPase CgtA
L1_008_000G1_scaffold_275_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(22542..22826)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=5 Tax=Erysipelotrichaceae RepID=C3RKD4_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
rpmA; 50S ribosomal protein L27
L1_008_000G1_scaffold_275_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22830..23153)
DNA (324bp) protein (108aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19381.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Predicted ribosomal protein
L1_008_000G1_scaffold_275_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(23158..23502)
DNA (345bp) protein (115aa)
50S ribosomal protein L21 n=5 Tax=Erysipelotrichaceae RepID=B0N2V3_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rplU; 50S ribosomal protein L21
L1_008_000G1_scaffold_275_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23625..24368)
DNA (744bp) protein (248aa)
spoIVFB; Stage IV sporulation protein FB (EC:3.4.24.-)
Peptidase, M50 family n=4 Tax=Erysipelotrichaceae RepID=B0N2V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48201.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_000G1_scaffold_275_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24343..24921)
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91932.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_000G1_scaffold_275_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24970..25749)
DNA (780bp) protein (260aa)
Site-determining protein n=5 Tax=Erysipelotrichaceae RepID=B0N2V0_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
septum site-determining protein MinD
L1_008_000G1_scaffold_275_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25742..26317)
DNA (576bp) protein (192aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R187_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34270.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
minC; septum site-determining protein MinC
L1_008_000G1_scaffold_275_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26292..26825)
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RKC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34271.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cell shape-determining protein
Displaying items 1-30 of 77 in total

View Taxonomy