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L1_008_000G1_scaffold_278

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_278_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..1912)
DNA (1911bp) protein (637aa)
Polysaccharide biosynthesis protein n=4 Tax=Erysipelotrichaceae RepID=B0N428_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48005.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
polysaccharide biosynthesis protein CapD
L1_008_000G1_scaffold_278_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2302..2985
DNA (684bp) protein (228aa)
Chain length determinant protein n=4 Tax=Erysipelotrichaceae RepID=B0N427_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EDS19199.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_008_000G1_scaffold_278_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2988..3764
DNA (777bp) protein (259aa)
PHP domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N426_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31791.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PHP-like protein
L1_008_000G1_scaffold_278_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3765..4490
DNA (726bp) protein (242aa)
ywqD; Tyrosine-protein kinase YwqD (EC:2.7.10.2)
Capsular exopolysaccharide family n=3 Tax=Erysipelotrichaceae RepID=B0N425_9FIRM
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EHQ48002.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_000G1_scaffold_278_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4493..5470
DNA (978bp) protein (326aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31788.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
multidomain protein with s-layer
L1_008_000G1_scaffold_278_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5763..6311
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N423_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:CCZ31787.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_000G1_scaffold_278_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6344..6982
DNA (639bp) protein (213aa)
Sortase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N422_9FIRM
Sortase family protein {ECO:0000313|EMBL:CCZ31786.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
LPXTG-site transpeptidase (sortase) family protein
L1_008_000G1_scaffold_278_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6984..7811
DNA (828bp) protein (276aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31785.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_000G1_scaffold_278_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7892..8212)
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91671.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_000G1_scaffold_278_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8240..9079)
DNA (840bp) protein (280aa)
Cof-like hydrolase n=5 Tax=Erysipelotrichaceae RepID=B0N419_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHQ47996.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cof family hydrolase
L1_008_000G1_scaffold_278_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9103..10404)
DNA (1302bp) protein (434aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=4 Tax=Erysipelotrichaceae RepID=B0N418_9FIRM
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CCZ31783.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_278_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10487..10858)
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N417_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19189.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_278_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10818..11771)
DNA (954bp) protein (318aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N416_9FIRM
L1_008_000G1_scaffold_278_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11794..12078)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N415_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31781.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_278_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12075..12824)
DNA (750bp) protein (250aa)
Stage II sporulation protein P n=5 Tax=Erysipelotrichaceae RepID=B0N414_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:CCZ31780.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_000G1_scaffold_278_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12877..13836)
DNA (960bp) protein (320aa)
germination protease (EC:3.4.24.78)
GPR endopeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N413_9FIRM
Germination protease {ECO:0000313|EMBL:CCZ31779.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_278_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


13981..14241
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=5 Tax=Erysipelotrichaceae RepID=B0N412_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
SSU ribosomal protein S20P
L1_008_000G1_scaffold_278_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14275..16050
DNA (1776bp) protein (592aa)
Oligoendopeptidase F n=5 Tax=Erysipelotrichaceae RepID=B0N411_9FIRM
Oligoendopeptidase F {ECO:0000313|EMBL:EHM91662.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
oligoendopeptidase F
L1_008_000G1_scaffold_278_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16079..17488)
DNA (1410bp) protein (470aa)
Uracil-xanthine permease n=2 Tax=Coprobacillus RepID=H1AGL6_9FIRM
Putative permease {ECO:0000313|EMBL:EDS19182.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
xanthine permease
L1_008_000G1_scaffold_278_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17695..18750
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=4 Tax=Erysipelotrichaceae RepID=B0N409_9FIRM
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_008_000G1_scaffold_278_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18807..19079
DNA (273bp) protein (91aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N408_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19180.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_278_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19052..19912)
DNA (861bp) protein (287aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Probable endonuclease 4 n=5 Tax=Erysipelotrichaceae RepID=B0N407_9FIRM
endonuclease IV
L1_008_000G1_scaffold_278_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19912..21282)
DNA (1371bp) protein (457aa)
DEAD/DEAH box helicase n=2 Tax=Erysipelotrichaceae RepID=B0N406_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDS19178.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DEAD/DEAH box helicase
L1_008_000G1_scaffold_278_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21587..21940
DNA (354bp) protein (118aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N405_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31771.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_278_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21956..22867
DNA (912bp) protein (304aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Erysipelotrichaceae RepID=B0N404_9FIRM
L1_008_000G1_scaffold_278_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22899..24236)
DNA (1338bp) protein (446aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGK9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ47980.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Na+ driven multidrug efflux pump
L1_008_000G1_scaffold_278_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24378..25229
DNA (852bp) protein (284aa)
Cof-like hydrolase n=5 Tax=Erysipelotrichaceae RepID=C3RLQ7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHQ47979.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000G1_scaffold_278_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25649..26401)
DNA (753bp) protein (251aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Putative GTP cyclohydrolase 1 type 2 n=5 Tax=Erysipelotrichaceae RepID=B0N400_9FIRM
hypothetical protein
L1_008_000G1_scaffold_278_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26388..27080)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N3Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19171.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative SAM-dependent methyltransferase
L1_008_000G1_scaffold_278_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27082..28335)
DNA (1254bp) protein (418aa)
RNA polymerase sigma factor SigA n=5 Tax=Erysipelotrichaceae RepID=B0N3Z8_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
sigA; RNA polymerase sigma factor RpoD
Displaying items 1-30 of 64 in total

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