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L1_008_000G1_scaffold_311

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_311_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

182..484
DNA (303bp) protein (101aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridium RepID=B6FIS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22370.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
TrpR-related protein YerC/YecD
L1_008_000G1_scaffold_311_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

474..1604
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84047.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_311_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1627..2244)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22368.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of unknown function (DUF1836).
L1_008_000G1_scaffold_311_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2465..3637
DNA (1173bp) protein (391aa)
Transporter gate domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIS6_9CLOT
Transporter gate domain protein {ECO:0000313|EMBL:EEA84045.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_311_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3703..4080
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22366.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_311_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4077..6302
DNA (2226bp) protein (742aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=2 Tax=Clostridium RepID=B6FIS4_9CLOT
L1_008_000G1_scaffold_311_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6413..6655
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84042.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_311_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6722..7291
DNA (570bp) protein (190aa)
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIT6_9CLOT
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEA84041.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphatidylglycerophosphate synthase
L1_008_000G1_scaffold_311_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7363..7779)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22362.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_311_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7935..9305
DNA (1371bp) protein (457aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEA84039.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEA84039.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIT4_9CLOT
L1_008_000G1_scaffold_311_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9635..9811
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KN69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85968.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000G1_scaffold_311_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9821..10156
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=A5KN70_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGG85967.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000G1_scaffold_311_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10288..11115
DNA (828bp) protein (276aa)
Chromosome partitioning protein parA n=3 Tax=Firmicutes RepID=Q1JB48_STRPB
chromosome partitioning protein parA
Uncharacterized protein {ECO:0000313|EMBL:EGG85966.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000G1_scaffold_311_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

11069..12013
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33678.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
chromosome partitioning protein parB
L1_008_000G1_scaffold_311_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12207..16349
DNA (4143bp) protein (1381aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Lachnospiraceae RepID=A5KN73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85964.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
collagen adhesion protein
L1_008_000G1_scaffold_311_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

16353..16445
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33685.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L1_008_000G1_scaffold_311_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

16500..16802
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33689.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L1_008_000G1_scaffold_311_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

16813..17085
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=A5KN76_9FIRM
hypothetical protein
Hypothetical membrane associated protein {ECO:0000313|EMBL:CCZ33692.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_000G1_scaffold_311_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17069..17212
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KN77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24026.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L1_008_000G1_scaffold_311_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17214..17909
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QZ10_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK24029.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L1_008_000G1_scaffold_311_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17923..18129
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KN82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85958.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000G1_scaffold_311_22
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18122..18346
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=2 Tax=Firmicutes RepID=Q1JB54_STRPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGG85957.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000G1_scaffold_311_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

18381..26444
DNA (8064bp) protein (2688aa)
Superfamily II DNA and RNA helicase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QZ15_9FIRM
Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:CCZ33703.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
superfamily II DNA/RNA helicase
L1_008_000G1_scaffold_311_24
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26520..26849
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=2 Tax=Firmicutes RepID=Q1JB68_STRPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGG85943.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000G1_scaffold_311_25
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26854..27792
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K112_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60395.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
L1_008_000G1_scaffold_311_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27898..28887
DNA (990bp) protein (330aa)
LtrC n=2 Tax=Firmicutes RepID=Q1JB71_STRPB
LtrC
Uncharacterized protein {ECO:0000313|EMBL:EGG85940.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000G1_scaffold_311_27
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28960..29262
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AUR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85939.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000G1_scaffold_311_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

29488..29820
DNA (333bp) protein (111aa)
Relaxosome component n=4 Tax=Firmicutes RepID=Q1JB72_STRPB
relaxosome component
Relaxosome component {ECO:0000313|EMBL:CCZ33711.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_000G1_scaffold_311_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

29820..31232
DNA (1413bp) protein (471aa)
Relaxase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4P3_9FIRM
Relaxase {ECO:0000313|EMBL:CCZ33714.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
relaxase
L1_008_000G1_scaffold_311_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31174..31992
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RG09_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGG85936.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Displaying items 1-30 of 76 in total

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