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L1_008_000G1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_315_1
unknown

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comp(79..282)
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000G1_scaffold_315_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1064..1912
DNA (849bp) protein (283aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002895F52
ABC transporter arginine-binding protein 1 {ECO:0000313|EMBL:CEL28404.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ABC transporter substrate-binding protein
L1_008_000G1_scaffold_315_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1920..2579
DNA (660bp) protein (220aa)
ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289B365
Arginine transport system permease protein ArtQ {ECO:0000313|EMBL:CEL28403.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ABC transporter, inner-membrane component
L1_008_000G1_scaffold_315_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2579..3226
DNA (648bp) protein (216aa)
ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289C2CB
Inner membrane amino-acid ABC transporter permease protein YecS {ECO:0000313|EMBL:CEL28402.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ABC transporter inner-membrane protein
L1_008_000G1_scaffold_315_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3231..4037
DNA (807bp) protein (269aa)
L-cystine import ATP-binding protein TcyN {ECO:0000313|EMBL:CEL28401.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEL28401.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ATP-binding protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002881C5B
ABC transporter
L1_008_000G1_scaffold_315_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4034..5266
DNA (1233bp) protein (411aa)
Putative hydrolase {ECO:0000313|EMBL:CEL28400.1}; EC=3.-.-.- {ECO:0000313|EMBL:CEL28400.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
peptidase M20 n=1 Tax=Pseudomonas extremaustralis RepID=UPI000288CAC8
amino acid hydrolase
L1_008_000G1_scaffold_315_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5283..5993
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI000288FD10
Uncharacterized protein {ECO:0000313|EMBL:CEL28399.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
pucF; Allantoate deiminase
L1_008_000G1_scaffold_315_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6076..6681
DNA (606bp) protein (202aa)
XRE family transcriptional regulator n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002897F98
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:CEL28398.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
putative transcriptional regulatory protein
L1_008_000G1_scaffold_315_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..8185
DNA (1008bp) protein (336aa)
membrane protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002882C64
Purine-binding protein {ECO:0000313|EMBL:CEL28397.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Basic membrane lipoprotein
L1_008_000G1_scaffold_315_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..9702
DNA (1518bp) protein (506aa)
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:CEL28396.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CEL28396.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Monosaccharide-transporting ATPase n=1 Tax=Brenneria sp. EniD312 RepID=G7LMC7_9ENTR
nucleoside ABC transporter ATP-binding protein
L1_008_000G1_scaffold_315_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9699..10799
DNA (1101bp) protein (367aa)
sugar ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028995D9
L-arabinose transporter permease protein {ECO:0000313|EMBL:CEL28395.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
yufP; permease protein of sugar ABC transporter
L1_008_000G1_scaffold_315_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10789..11715
DNA (927bp) protein (309aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289F946
Branched-chain amino acid transport system / permease component {ECO:0000313|EMBL:CEL28394.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
inner-membrane translocator
L1_008_000G1_scaffold_315_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12668
DNA (915bp) protein (305aa)
Peptidoglycan deacetylase {ECO:0000313|EMBL:CEL28393.1}; EC=3.5.1.- {ECO:0000313|EMBL:CEL28393.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ribulose-5-phosphate 3-epimerase n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289A3FF
ribulose-5-phosphate 3-epimerase
L1_008_000G1_scaffold_315_14
unknown

Not on your lists

13043..13204
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_000G1_scaffold_315_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13155..14174
DNA (1020bp) protein (340aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas extremaustralis RepID=UPI000287FF09
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CEL28392.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_315_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14264..15604)
DNA (1341bp) protein (447aa)
Arabinose efflux permease family protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3BH36_9PSED
Proline/betaine transporter {ECO:0000313|EMBL:CEL28391.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
general substrate transporter
L1_008_000G1_scaffold_315_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15601..15726)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL28390.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
L1_008_000G1_scaffold_315_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15902..17113)
DNA (1212bp) protein (404aa)
Creatinase {ECO:0000313|EMBL:CEL28389.1}; EC=3.5.3.3 {ECO:0000313|EMBL:CEL28389.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
creatininase n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028901BA
creatininase
L1_008_000G1_scaffold_315_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18113..18745)
DNA (633bp) protein (211aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289CCAB
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CEL28388.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_315_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..19670)
DNA (798bp) protein (266aa)
ABC transporter-like protein n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H475_PSEUT
Octopine permease ATP-binding protein P {ECO:0000313|EMBL:CEL28387.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ABC transporter-like protein
L1_008_000G1_scaffold_315_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19679..20338)
DNA (660bp) protein (220aa)
amino acid ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002884087
Inner membrane amino-acid ABC transporter permease protein YecS {ECO:0000313|EMBL:CEL28386.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
glnP3; putative amino-acid ABC transporter permease protein
L1_008_000G1_scaffold_315_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20348..20998)
DNA (651bp) protein (217aa)
amino acid ABC transporter permease n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028883AF
Arginine transport system permease protein ArtQ {ECO:0000313|EMBL:CEL28385.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_000G1_scaffold_315_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21029..21880)
DNA (852bp) protein (284aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002899D34
Glutamine-binding periplasmic protein {ECO:0000313|EMBL:CEL28384.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
glnH; ABC transporter, solute-binding component
L1_008_000G1_scaffold_315_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22059..22985
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289DC20
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:CEL28383.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
gcvA1; DNA-binding transcriptional activator GcvA
L1_008_000G1_scaffold_315_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23100..24314
DNA (1215bp) protein (405aa)
Creatinase {ECO:0000313|EMBL:CEL28382.1}; EC=3.5.3.3 {ECO:0000313|EMBL:CEL28382.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
creatininase n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002881066
pepQ; creatinase
L1_008_000G1_scaffold_315_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24635..25384
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudomonas extremaustralis RepID=UPI000288338C
Uncharacterized protein {ECO:0000313|EMBL:CEL28381.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
L1_008_000G1_scaffold_315_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25500..25724
DNA (225bp) protein (75aa)
AlpA family transcriptional regulator n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002889FC7
Prophage CP4-57 regulatory protein (AlpA) {ECO:0000313|EMBL:CEL28380.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
putative phage-like protein
L1_008_000G1_scaffold_315_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25730..26575
DNA (846bp) protein (282aa)
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CEL28379.1}; EC=3.6.-.- {ECO:0000313|EMBL:CEL28379.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
cobyrinic acid a,c-diamide synthase n=1 Tax=Pseudomonas extremaustralis RepID=UPI000287E4C5
putative chromosome partitioning-like protein
L1_008_000G1_scaffold_315_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26661..26870
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens BRIP34879 RepID=L7HB29_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:CEL28378.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
L1_008_000G1_scaffold_315_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26885..27604
DNA (720bp) protein (240aa)
chromosome partitioning protein ParB n=1 Tax=Pseudomonas extremaustralis RepID=UPI000289001E
Uncharacterized protein {ECO:0000313|EMBL:CEL28377.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
Displaying items 1-30 of 75 in total

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