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L1_008_000G1_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_319_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32..847)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25633.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_319_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(900..2009)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25634.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
lipoprotein, putative
L1_008_000G1_scaffold_319_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2009..2785)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25635.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_319_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2800..3468)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25636.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_319_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3653..4864)
DNA (1212bp) protein (404aa)
Threonine dehydratase n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA21_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:CDA25637.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
threonine dehydratase
L1_008_000G1_scaffold_319_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4858..5808)
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDP0_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
cell division protein FtsY
L1_008_000G1_scaffold_319_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5834..9394)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLX1_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
condensin subunit Smc
L1_008_000G1_scaffold_319_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9398..10132)
DNA (735bp) protein (245aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Ribonuclease 3 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFJ9_9FIRM
ribonuclease III
L1_008_000G1_scaffold_319_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10151..10387)
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVZ2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
acyl carrier protein
L1_008_000G1_scaffold_319_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10404..11426)
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA27_9FIRM
fatty acid/phospholipid synthesis protein plsX
L1_008_000G1_scaffold_319_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11616..11795)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=5 Tax=Clostridiales RepID=C4Z919_EUBR3
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_000G1_scaffold_319_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11800..12324)
DNA (525bp) protein (175aa)
Predicted Zn-finger-like protein possible nucleic acid binding n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTM6_9FIRM
Predicted Zn-finger-like protein possible nucleic acid binding {ECO:0000313|EMBL:CCZ79024.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L1_008_000G1_scaffold_319_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12420..13610)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFK3_9FIRM
L1_008_000G1_scaffold_319_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13750..15069
DNA (1320bp) protein (440aa)
UPF0348 protein EUR_09680 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVZ7_9FIRM
UPF0348 protein BN528_02379 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
cytidyltransferase-related domain
L1_008_000G1_scaffold_319_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15089..16201)
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA32_9FIRM
L1_008_000G1_scaffold_319_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16217..16840)
DNA (624bp) protein (208aa)
Predicted double-stranded RNA/RNA-DNA hybrid binding protein (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25648.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_319_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16859..17611)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25649.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_319_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17674..19359)
DNA (1686bp) protein (562aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Glutaminyl-tRNA synthetase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFK4_9FIRM
glutaminyl-tRNA synthetase
L1_008_000G1_scaffold_319_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19471..20460)
DNA (990bp) protein (330aa)
Putative ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YW02_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDA25651.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative ABC transporter permease protein
L1_008_000G1_scaffold_319_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20462..21553)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25652.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative ABC transporter permease protein
L1_008_000G1_scaffold_319_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21546..23093)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25653.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_319_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23180..24487)
DNA (1308bp) protein (436aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLY3_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDA25654.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative ABC transporter substrate-binding protein
L1_008_000G1_scaffold_319_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24652..25545)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25655.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_319_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25796..30055
DNA (4260bp) protein (1420aa)
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YW04_9FIRM
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase {ECO:0000313|EMBL:CDA25656.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase
L1_008_000G1_scaffold_319_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30125..30976)
DNA (852bp) protein (284aa)
Permeases of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA40_9FIRM
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CDA25657.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_319_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31026..31760)
DNA (735bp) protein (245aa)
Putative short-chain dehydrogenases/reductase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDQ5_9FIRM
Putative short-chain dehydrogenases/reductase {ECO:0000313|EMBL:CDA25658.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative short-chain dehydrogenases/reductase
L1_008_000G1_scaffold_319_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31769..32800)
DNA (1032bp) protein (344aa)
Photoproduct lyase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLY6_9FIRM
Photoproduct lyase {ECO:0000313|EMBL:CDA25659.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
spore photoproduct
L1_008_000G1_scaffold_319_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32775..33626)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25660.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
spore photoproduct
L1_008_000G1_scaffold_319_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33960..34391)
DNA (432bp) protein (144aa)
Flavodoxin short chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YW09_9FIRM
Flavodoxin short chain {ECO:0000313|EMBL:CDA25661.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
flavodoxin, short chain
L1_008_000G1_scaffold_319_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34404..35021)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25662.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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