ggKbase home page

L1_008_000G1_scaffold_343

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_343_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

344..475
-----------------
DNA (132bp)
protein (44aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLN6_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16711.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_000G1_scaffold_343_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(872..2101)
-----------------
DNA (1230bp)
protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YE72_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21324.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L1_008_000G1_scaffold_343_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2557..4212)
-----------------
DNA (1656bp)
protein (552aa)
Acetyl-CoA synthetase n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZKQ0_BACSE
Acetyl-CoA synthetase {ECO:0000313|EMBL:EPH21325.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
putative Acyl-CoA synthetase
L1_008_000G1_scaffold_343_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4254..4808)
-----------------
DNA (555bp)
protein (185aa)
Cupin domain protein n=3 Tax=Bacteroides RepID=B0NLR2_BACSE
Cupin domain protein {ECO:0000313|EMBL:CDA48219.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative regulatory protein
L1_008_000G1_scaffold_343_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4837..5610)
-----------------
DNA (774bp)
protein (258aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Pyrroline-5-carboxylate reductase n=2 Tax=Bacteroides RepID=R6A8L6_9BACE
pyrroline-5-carboxylate reductase
L1_008_000G1_scaffold_343_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5734..6855)
-----------------
DNA (1122bp)
protein (374aa)
Aminotransferase, class III n=2 Tax=Bacteroides stercoris RepID=B0NLQ9_BACSE
Aminotransferase, class III {ECO:0000313|EMBL:EDS16703.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
aminotransferase class-III
L1_008_000G1_scaffold_343_7
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6889..7857)
-----------------
DNA (969bp)
protein (323aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AB49_9BACE
L1_008_000G1_scaffold_343_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8069..9274)
-----------------
DNA (1206bp)
protein (402aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=3 Tax=Bacteroides RepID=S3YG65_BACSE
Putative argininosuccinate synthase {ECO:0000313|EMBL:CDA48213.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L1_008_000G1_scaffold_343_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9371..9928)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NLQ5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16699.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_000G1_scaffold_343_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9974..10447)
-----------------
DNA (474bp)
protein (158aa)
Arginine repressor n=2 Tax=Bacteroides RepID=R6ANM6_9BACE
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
ArgR family transcriptional regulator
L1_008_000G1_scaffold_343_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10879..13407
-----------------
DNA (2529bp)
protein (843aa)
Unsaturated rhamnogalacturonyl hydrolase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YE83_BACSE
Unsaturated rhamnogalacturonyl hydrolase {ECO:0000313|EMBL:EPH21334.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
L1_008_000G1_scaffold_343_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13410..16199
-----------------
DNA (2790bp)
protein (930aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZKQ6_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21335.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L1_008_000G1_scaffold_343_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16196..18031
-----------------
DNA (1836bp)
protein (612aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YG69_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21336.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
silent information regulator protein Sir2
L1_008_000G1_scaffold_343_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18060..19610
-----------------
DNA (1551bp)
protein (517aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLP9_BACSE
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDS16693.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_000G1_scaffold_343_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19742..21208
-----------------
DNA (1467bp)
protein (489aa)
Rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YUS7_BACSE
Rhamnulokinase {ECO:0000313|EMBL:EPH21338.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L1_008_000G1_scaffold_343_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21240..22493
-----------------
DNA (1254bp)
protein (418aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=3 Tax=Bacteroides RepID=B0NLS0_BACSE
L1_008_000G1_scaffold_343_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22584..23615
-----------------
DNA (1032bp)
protein (344aa)
L-rhamnose-proton symport protein (RhaT) n=3 Tax=Bacteroides RepID=B0NLR9_BACSE
L-rhamnose-proton symport protein (RhaT) {ECO:0000313|EMBL:EDS16690.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
sugar:proton symporter
L1_008_000G1_scaffold_343_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23651..24460
-----------------
DNA (810bp)
protein (270aa)
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=2 Tax=Bacteroides stercoris RepID=S3YG75_BACSE
Rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EPH21341.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L1_008_000G1_scaffold_343_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24472..25626
-----------------
DNA (1155bp)
protein (385aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=2 Tax=Bacteroides RepID=B0NLR7_BACSE
Lactaldehyde reductase {ECO:0000313|EMBL:CDA48197.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L1_008_000G1_scaffold_343_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25644..26966
-----------------
DNA (1323bp)
protein (441aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDS16687.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDS16687.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLN5_BACSE
glycosyl hydrolase family 88
L1_008_000G1_scaffold_343_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27114..28040
-----------------
DNA (927bp)
protein (309aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=B0NLN4_BACSE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS16686.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
transcriptional regulator
L1_008_000G1_scaffold_343_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28315..31509
-----------------
DNA (3195bp)
protein (1065aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=B0NLN3_BACSE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS16685.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
membrane protein
L1_008_000G1_scaffold_343_23
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31528..33180
-----------------
DNA (1653bp)
protein (551aa)
SusD family protein n=2 Tax=Bacteroides RepID=B0NLN2_BACSE
SusD family protein {ECO:0000313|EMBL:CDA48173.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
membrane protein
L1_008_000G1_scaffold_343_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33310..34701
-----------------
DNA (1392bp)
protein (464aa)
Arylsulfatase {ECO:0000313|EMBL:EDS16683.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDS16683.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
arylsulfatase (EC:3.1.6.1)
Arylsulfatase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM9_BACSE
L1_008_000G1_scaffold_343_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34851..35255
-----------------
DNA (405bp)
protein (135aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM8_BACSE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDS16682.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
beta-galactosidase
L1_008_000G1_scaffold_343_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35562..39059)
-----------------
DNA (3498bp)
protein (1166aa)
N-acetyl-beta-hexosaminidase (EC:3.2.1.52)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM6_BACSE
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EDS16680.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_000G1_scaffold_343_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39112..40008)
-----------------
DNA (897bp)
protein (299aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM5_BACSE
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EDS16679.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycerophosphoryl diester phosphodiesterase
L1_008_000G1_scaffold_343_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40070..41518)
-----------------
DNA (1449bp)
protein (483aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16678.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_000G1_scaffold_343_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41560..43332)
-----------------
DNA (1773bp)
protein (591aa)
SusD family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM3_BACSE
SusD family protein {ECO:0000313|EMBL:EDS16677.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
SusD family.
L1_008_000G1_scaffold_343_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43345..46341)
-----------------
DNA (2997bp)
protein (999aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLM2_BACSE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS16676.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Outer membrane receptor proteins, mostly Fe transport
Displaying items 1-30 of 42 in total

View Taxonomy