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L1_008_000G1_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_344_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144..2588)
DNA (2445bp) protein (815aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=2 Tax=Bifidobacterium dentium RepID=D2Q6Y0_BIFDB
L1_008_000G1_scaffold_344_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2898..3335
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S8E1_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26020.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3430..3804)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8E2_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26019.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3933..5033
DNA (1101bp) protein (367aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=2 Tax=Bifidobacterium dentium RepID=D2Q6K1_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26018.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5211..6839)
DNA (1629bp) protein (543aa)
Predicted sodium/proline symporter n=2 Tax=Bifidobacterium dentium RepID=D2Q6K0_BIFDB
sodium/proline symporter
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26017.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6958..8811)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8E5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40886.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_344_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8998..11754
DNA (2757bp) protein (919aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J8_BIFDB
L1_008_000G1_scaffold_344_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11871..12596
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9G5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40888.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_344_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12667..13365
DNA (699bp) protein (233aa)
carbonic anhydrase (EC:4.2.1.1)
Carbonate dehydratase {ECO:0000313|EMBL:ETO94972.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ETO94972.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Carbonic anhydrase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J6_BIFDB
L1_008_000G1_scaffold_344_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13403..14704
DNA (1302bp) protein (434aa)
Hemolysin-like protein containing CBS domains n=4 Tax=Bifidobacterium dentium RepID=D2Q6J5_BIFDB
hemolysin-like protein
Hemolysin-like protein containing CBS domains {ECO:0000313|EMBL:ADB08717.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_344_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14815..15294
DNA (480bp) protein (160aa)
Ferritin-like protein n=2 Tax=Bifidobacterium dentium RepID=B1S8K4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB08716.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_344_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15403..16128)
DNA (726bp) protein (242aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J3_BIFDB
metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:ADB08715.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_344_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16739..17182)
DNA (444bp) protein (148aa)
Large-conductance mechanosensitive channel n=4 Tax=Bifidobacterium dentium RepID=D2Q6J2_BIFDB
large-conductance mechanosensitive channel
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26009.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17430..17981)
DNA (552bp) protein (184aa)
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:ETO95004.1}; EC=5.3.-.- {ECO:0000313|EMBL:ETO95004.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar isomerase or sugar amino transferase (EC:2.7.1.2)
6-phospho 3-hexuloisomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q9H1_9BIFI
L1_008_000G1_scaffold_344_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17978..18598)
DNA (621bp) protein (207aa)
Orotidine 5'-phosphate decarboxylase/HUMPS family {ECO:0000313|EMBL:EFM40895.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EFM40895.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar decarboxylase or lyase/synthase (EC:4.1.1.85)
Orotidine 5'-phosphate decarboxylase/HUMPS family n=2 Tax=Bifidobacterium dentium RepID=E0Q9H2_9BIFI
L1_008_000G1_scaffold_344_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18660..19631)
DNA (972bp) protein (324aa)
sugar kinase (EC:2.7.1.4)
Sugar kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q6I9_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26006.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_344_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19689..20444)
DNA (756bp) protein (252aa)
AP endonuclease, family 2 n=2 Tax=Bifidobacterium dentium RepID=E0Q9H4_9BIFI
sugar isomerase/epimerase
Xylose isomerase-like TIM barrel domain protein {ECO:0000313|EMBL:ETO95005.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_344_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20526..21851)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40898.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_344_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22041..23027)
DNA (987bp) protein (329aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q9H6_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO94983.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_344_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23321..24667
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q9H7_9BIFI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_344_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24983..25534)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40901.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_344_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25597..28266)
DNA (2670bp) protein (890aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA gyrase subunit A n=4 Tax=Bifidobacterium dentium RepID=D2Q6I3_BIFDB
L1_008_000G1_scaffold_344_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28292..30388)
DNA (2097bp) protein (699aa)
DNA gyrase subunit B {ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU003363};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gyrB; DNA gyrase (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NB15_9BIFI
L1_008_000G1_scaffold_344_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30620..31105)
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8L9_9BIFI
hypothetical protein
PF05258 family protein {ECO:0000313|EMBL:ETO94984.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_344_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31105..32295)
DNA (1191bp) protein (397aa)
DNA replication and repair protein RecF n=2 Tax=Bifidobacterium dentium RepID=E0Q9I2_9BIFI
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
recF; Recombinational DNA repair ATPase RecF
L1_008_000G1_scaffold_344_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32381..33505)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA polymerase III, subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Bifidobacterium dentium RepID=E0Q9I3_9BIFI
L1_008_000G1_scaffold_344_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33980..35482)
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium dentium RepID=B1S8M2_9BIFI
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dnaA; chromosomal replication initiator protein DnaA
L1_008_000G1_scaffold_344_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


35798..35932
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=3 Tax=Bifidobacterium dentium RepID=D2Q826_BIFDB
rpmH; 50S ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_344_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36635..37645
DNA (1011bp) protein (337aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Bifidobacterium dentium RepID=E0Q9I7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28133.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
yidC; YidC Inner membrane protein (Preprotein translocase subunit YidC)
L1_008_000G1_scaffold_344_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37765..38310
DNA (546bp) protein (182aa)
Jag protein n=2 Tax=Bifidobacterium dentium RepID=D2Q823_BIFDB
jag; Jag protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28132.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Displaying items 1-30 of 47 in total

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