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L1_008_000G1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_356_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..2260
DNA (2259bp) protein (753aa)
Rib/alpha/Esp surface antigen repeat (3 repeats) n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRX7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93909.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
esp; Enterococcal surface protein
L1_008_000G1_scaffold_356_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2401..2802
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRX6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93908.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_356_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2831..3109
DNA (279bp) protein (93aa)
DNA-binding protein HU n=2 Tax=Clostridium symbiosum RepID=E9SRX5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93907.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
histone family protein DNA-binding protein
L1_008_000G1_scaffold_356_4
unknown

Not on your lists

3150..3254
DNA (105bp) protein (35aa)

This feature has no annotations

L1_008_000G1_scaffold_356_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3248..3586
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRX4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93906.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_356_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3635..4042
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRX3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93905.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_356_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4504..4734
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRX1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93903.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_356_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4829..5230)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80589.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_356_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5230..5532)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93901.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_356_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5729..6547
DNA (819bp) protein (273aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRW8_CLOSY
MerR family Transcriptional regulator {ECO:0000313|EMBL:EGA93900.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
MerR family transcriptional regulator
L1_008_000G1_scaffold_356_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6558..7139
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SRW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05757.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_356_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7214..8572
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRW6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05756.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_356_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8853..9863
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRW5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05755.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_356_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9899..11110
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C996_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80583.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_356_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11269..11982)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SRW3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93895.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000G1_scaffold_356_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12063..14465)
DNA (2403bp) protein (801aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Endonuclease MutS2 n=2 Tax=Clostridium RepID=E9SRW2_CLOSY
MutS2 family protein
L1_008_000G1_scaffold_356_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15027..15587
DNA (561bp) protein (187aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Signal peptidase I n=3 Tax=Clostridium RepID=E9SRW1_CLOSY
signal peptidase I
L1_008_000G1_scaffold_356_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15937..17259
DNA (1323bp) protein (441aa)
PDZ/DHR/GLGF domain protein n=3 Tax=Clostridium RepID=U2DGI3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05750.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L1_008_000G1_scaffold_356_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17479..18423
DNA (945bp) protein (315aa)
HDIG domain protein n=4 Tax=Clostridium RepID=E9SRV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05749.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
uncharacterized domain HDIG
L1_008_000G1_scaffold_356_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18920..20566
DNA (1647bp) protein (549aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridium RepID=E9SRV8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05871.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide transport system, periplasmic component
L1_008_000G1_scaffold_356_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20583..21599
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05870.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000G1_scaffold_356_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21596..22450
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRV6_CLOSY
Peptide/opine/nickel ABC transporter {ECO:0000313|EMBL:EGA92792.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000G1_scaffold_356_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22495..23325
DNA (831bp) protein (277aa)
Oligopeptide/dipeptide ABC transporter n=3 Tax=Clostridium RepID=E7GQT9_CLOSY
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:EGA92793.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L1_008_000G1_scaffold_356_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23322..23936
DNA (615bp) protein (205aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRV4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05867.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC transporter
L1_008_000G1_scaffold_356_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24105..24863
DNA (759bp) protein (253aa)
Putative phosphoribosylaminoimidazole carboxylase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRV3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92795.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
NCAIR mutase (PurE)-related proteins
L1_008_000G1_scaffold_356_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24886..26328
DNA (1443bp) protein (481aa)
TIGR00299 family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRV2_CLOSY
UPF0272 protein HMPREF9474_03287 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
conserved hypothetical protein TIGR00299
L1_008_000G1_scaffold_356_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26375..27202
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQU3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92797.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
asparagine synthase
L1_008_000G1_scaffold_356_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27221..28099
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=3 Tax=Clostridium RepID=E9SRU9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05863.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LysR family transcriptional regulator
L1_008_000G1_scaffold_356_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28152..28727)
DNA (576bp) protein (192aa)
Chromate transport protein n=3 Tax=Clostridium RepID=E9SRU8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05862.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chromate transporter
L1_008_000G1_scaffold_356_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28714..29313)
DNA (600bp) protein (200aa)
Chromate transporter n=4 Tax=Clostridium RepID=E7GQU6_CLOSY
Chromate transporter {ECO:0000313|EMBL:EGA92800.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
chromate transporter
Displaying items 1-30 of 57 in total

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