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L1_008_000G1_scaffold_369

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_369_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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382..2544
DNA (2163bp) protein (721aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=4 Tax=Roseburia RepID=C7GFI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54780.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
conserved hypothetical protein TIGR02336
L1_008_000G1_scaffold_369_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2627..3985
DNA (1359bp) protein (453aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR95_9FIRM
Lactose-binding protein {ECO:0000313|EMBL:CDA54779.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000G1_scaffold_369_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4051..4935
DNA (885bp) protein (295aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=4 Tax=Roseburia RepID=D4KR94_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL09396.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_369_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4928..5734
DNA (807bp) protein (269aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia RepID=D4KX65_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA54776.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000G1_scaffold_369_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5731..6195
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GFI5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54775.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_369_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6146..7432
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54774.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_369_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7454..8533)
DNA (1080bp) protein (360aa)
Putative thiamine biosynthesis protein ApbE n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AS00_9FIRM
Putative thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:CDA54773.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_008_000G1_scaffold_369_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8772..9623
DNA (852bp) protein (284aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BN55_9FIRM
L1_008_000G1_scaffold_369_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9676..9900
DNA (225bp) protein (75aa)
UPF0291 protein RO1_13300 n=3 Tax=Roseburia intestinalis RepID=D4KX70_9FIRM
hypothetical protein
UPF0291 protein ROI_24230 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_369_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9875..10468
DNA (594bp) protein (198aa)
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBL09391.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
5,10-methenyltetrahydrofolate synthetase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR89_9FIRM
L1_008_000G1_scaffold_369_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10676..11944
DNA (1269bp) protein (423aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR88_9FIRM
L1_008_000G1_scaffold_369_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11982..13472
DNA (1491bp) protein (497aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR87_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000G1_scaffold_369_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13436..13936
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02246.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_369_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13926..14423
DNA (498bp) protein (166aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7G0_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EEV02247.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_369_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14476..15087
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=3 Tax=Roseburia RepID=D4KR86_9FIRM
Holliday junction DNA helicase subunit RuvA
L1_008_000G1_scaffold_369_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15107..16099
DNA (993bp) protein (331aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KX76_9FIRM
Holliday junction DNA helicase, RuvB subunit
L1_008_000G1_scaffold_369_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16196..16666
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7G3_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
cell division protein ZapA
L1_008_000G1_scaffold_369_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16768..19077
DNA (2310bp) protein (770aa)
Peptidase, U32 family {ECO:0000313|EMBL:EEV02251.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEV02251.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7G4_9FIRM
L1_008_000G1_scaffold_369_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19082..20458
DNA (1377bp) protein (459aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7G5_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EEV02252.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Bacterial cell division membrane protein
L1_008_000G1_scaffold_369_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20397..21887
DNA (1491bp) protein (497aa)
Cell division protein FtsI/penicillin-binding protein 2 n=2 Tax=Roseburia intestinalis RepID=D4KR81_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBL09383.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_369_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21967..22419
DNA (453bp) protein (151aa)
ADP-ribose pyrophosphatase n=4 Tax=Roseburia RepID=D4KR80_9FIRM
ADP-ribose pyrophosphatase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEV02147.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_369_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22452..22769
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G7K0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54751.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_369_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22780..23718
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR78_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09380.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_369_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23746..24183
DNA (438bp) protein (146aa)
Uncharacterized conserved protein n=3 Tax=Roseburia RepID=D4KX84_9FIRM
hypothetical protein
Sporulation protein YtfJ {ECO:0000313|EMBL:EEV02150.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_369_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24405..25043)
DNA (639bp) protein (213aa)
Ribose 5-phosphate isomerase RpiB n=4 Tax=Roseburia RepID=D4KR75_9FIRM
Ribose 5-phosphate isomerase RpiB
Ribose 5-phosphate isomerase RpiB {ECO:0000313|EMBL:CBL11976.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_369_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25163..26026)
DNA (864bp) protein (288aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B164_9FIRM
L1_008_000G1_scaffold_369_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26079..27494)
DNA (1416bp) protein (472aa)
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Uronate isomerase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR73_9FIRM
L1_008_000G1_scaffold_369_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27520..28530)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR72_9FIRM
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBL09374.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_369_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28855..30321
DNA (1467bp) protein (489aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase {ECO:0000313|EMBL:CBL11980.1}; EC=1.1.1.58 {ECO:0000313|EMBL:CBL11980.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Tagaturonate reductase n=2 Tax=Roseburia intestinalis RepID=D4KR71_9FIRM
L1_008_000G1_scaffold_369_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30336..31817
DNA (1482bp) protein (494aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase {ECO:0000313|EMBL:CBL09372.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBL09372.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
D-altronate dehydratase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR70_9FIRM
Displaying items 1-30 of 52 in total

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