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L1_008_000G1_scaffold_370

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_370_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142..1122)
DNA (981bp) protein (327aa)
fkbP; secreted peptidyl-prolyl cis-trans isomerase protein (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bifidobacterium dentium RepID=E1NCK7_9BIFI
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_370_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1179..2312
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAK8_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27822.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_370_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2312..3319
DNA (1008bp) protein (336aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E1NCK9_9BIFI
Putative lipoprotein {ECO:0000313|EMBL:ETO96588.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000G1_scaffold_370_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3426..4394
DNA (969bp) protein (323aa)
thioredoxin domain-containing protein (EC:1.8.1.9)
Thioredoxin domain-containing protein n=2 Tax=Bifidobacterium dentium RepID=D2Q6E8_BIFDB
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ETO96627.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_370_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4435..5049)
DNA (615bp) protein (205aa)
Adenylate cyclase n=4 Tax=Bifidobacterium dentium RepID=D2Q6E7_BIFDB
cyaB; adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:ADB10512.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_370_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5316..5705
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP n=4 Tax=Bifidobacterium dentium RepID=D2Q6E6_BIFDB
psp1; endoribonuclease L-PSP
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27818.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_370_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5943..7361
DNA (1419bp) protein (473aa)
Amino acid permease n=2 Tax=Bifidobacterium dentium RepID=E0Q4H1_9BIFI
Amino acid permease {ECO:0000313|EMBL:EFM42539.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
amino acid permease
L1_008_000G1_scaffold_370_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7425..9215
DNA (1791bp) protein (597aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=E0Q4H2_9BIFI
L1_008_000G1_scaffold_370_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9224..10798
DNA (1575bp) protein (525aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.17)
Diaminopimelate decarboxylase n=2 Tax=Bifidobacterium dentium RepID=E0Q4H3_9BIFI
L1_008_000G1_scaffold_370_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10819..11409)
DNA (591bp) protein (197aa)
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system) (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=2 Tax=Bifidobacterium dentium RepID=E0Q4H4_9BIFI
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EFM42542.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_370_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11636..12952
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thrA; homoserine dehydrogenase (EC:2.7.2.4)
Homoserine dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q4H5_9BIFI
L1_008_000G1_scaffold_370_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13097..14101
DNA (1005bp) protein (335aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Homoserine kinase n=4 Tax=Bifidobacterium dentium RepID=D2Q6E0_BIFDB
L1_008_000G1_scaffold_370_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14098..15558
DNA (1461bp) protein (487aa)
Maf-like protein (EC:3.6.1.13)
Maf-like protein {ECO:0000313|EMBL:ADB10504.1}; EC=3.6.1.13 {ECO:0000313|EMBL:ADB10504.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Maf-like protein n=2 Tax=Bifidobacterium dentium RepID=D2Q6D9_BIFDB
L1_008_000G1_scaffold_370_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15694..16812
DNA (1119bp) protein (373aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q4H8_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFM42546.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_370_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17112..18734
DNA (1623bp) protein (541aa)
xylB; xylulokinase (EC:2.7.1.30)
Carbohydrate kinase, FGGY family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4H9_9BIFI
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:ETO96591.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_370_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18775..19467
DNA (693bp) protein (231aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:4.1.2.17)
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EFM42548.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EFM42548.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L-ribulose-5-phosphate 4-epimerase n=4 Tax=Bifidobacterium dentium RepID=D2Q6D6_BIFDB
L1_008_000G1_scaffold_370_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19555..21072
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q6D5_BIFDB
L1_008_000G1_scaffold_370_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21365..23293)
DNA (1929bp) protein (643aa)
AMP-binding enzyme n=2 Tax=Bifidobacterium dentium RepID=E0Q4I2_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:EFM42550.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
fadD; long-chain-fatty-acid--CoA ligase
L1_008_000G1_scaffold_370_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23886..27839
DNA (3954bp) protein (1318aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM42551.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM42551.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E1NCM5_9BIFI
L1_008_000G1_scaffold_370_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28127..29002
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Bifidobacterium dentium RepID=E0Q4I4_9BIFI
pdxS; pyridoxal biosynthesis lyase PdxS
L1_008_000G1_scaffold_370_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29155..29859
DNA (705bp) protein (235aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Glutamine amidotransferase subunit PdxT n=2 Tax=Bifidobacterium dentium RepID=E0Q4I5_9BIFI
pdxT; glutamine amidotransferase subunit PdxT
L1_008_000G1_scaffold_370_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30489..31841
DNA (1353bp) protein (451aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4I6_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM42554.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugars ABC transporter substrate-binding protein
L1_008_000G1_scaffold_370_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32128..32964
DNA (837bp) protein (279aa)
Permease protein of ABC transporter system for sugars n=2 Tax=Bifidobacterium dentium RepID=D2Q6C5_BIFDB
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96593.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_370_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33014..34006
DNA (993bp) protein (331aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4I8_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM42556.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter permease
L1_008_000G1_scaffold_370_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34146..36248
DNA (2103bp) protein (701aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q6C3_BIFDB
L1_008_000G1_scaffold_370_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36497..37558
DNA (1062bp) protein (354aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q4J0_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO96581.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_370_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37825..38688
DNA (864bp) protein (288aa)
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFM42396.1}; EC=1.1.1.274 {ECO:0000313|EMBL:EFM42396.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4J3_9BIFI
aldo/keto reductase family oxidoreductase
L1_008_000G1_scaffold_370_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38857..39606
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAP7_9BIFI
hypothetical protein
PF07510 family protein {ECO:0000313|EMBL:ETO96579.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_370_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39686..40912
DNA (1227bp) protein (409aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=2 Tax=Bifidobacterium dentium RepID=E0Q4J6_9BIFI
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EFM42399.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
NRAMP family Mn2+ and Fe2+ transporter
L1_008_000G1_scaffold_370_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40993..42552
DNA (1560bp) protein (520aa)
Transporter, MFS superfamily n=2 Tax=Bifidobacterium dentium RepID=D2Q6B5_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27788.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
MFS superfamily transporter
Displaying items 1-30 of 49 in total

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