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L1_008_000G1_scaffold_383

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_383_31
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27207..27575
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Roseburia intestinalis RepID=D4KNU9_9FIRM
LSU ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_32
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27588..27899
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=3 Tax=Roseburia RepID=D4KNV0_9FIRM
LSU ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_33
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27922..28461
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Roseburia RepID=C7GCZ3_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
rplE; 50S ribosomal protein L5
L1_008_000G1_scaffold_383_34
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28477..28662
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=3 Tax=Roseburia RepID=D4KNV1_9FIRM
Ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_383_35
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28723..29124
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=4 Tax=Roseburia RepID=D4KNV2_9FIRM
Ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_383_36
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29352..29891
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5L7_ROSHA
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000G1_scaffold_383_37
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29910..30278
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=4 Tax=Roseburia RepID=D4KNV3_9FIRM
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_38
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30297..30806
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=3 Tax=Roseburia RepID=D4KNV4_9FIRM
SSU ribosomal protein S5P
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_39
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30821..31006
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=4 Tax=Roseburia RepID=D4KNV5_9FIRM
LSU ribosomal protein L30P
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_383_40
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31031..31471
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=4 Tax=Roseburia RepID=D4KNV6_9FIRM
LSU ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_383_41
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31471..32787
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=4 Tax=Roseburia RepID=D4KNV7_9FIRM
protein translocase subunit secY/sec61 alpha
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_42
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32995..33639
DNA (645bp) protein (215aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Adenylate kinase n=3 Tax=Roseburia RepID=D4KNV9_9FIRM
L1_008_000G1_scaffold_383_43
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33653..34450
DNA (798bp) protein (266aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBL08562.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methionine aminopeptidase n=2 Tax=Roseburia intestinalis RepID=D4KNW0_9FIRM
L1_008_000G1_scaffold_383_44
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34485..34748
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GCY1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54278.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_45
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34767..34985
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=5 Tax=Roseburia RepID=D4KNW2_9FIRM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_46
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


35604..35972
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=4 Tax=Roseburia RepID=D4KUH7_9FIRM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_47
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


36124..36516
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=4 Tax=Roseburia RepID=D4KNW4_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_383_48
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


36536..37129
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=4 Tax=Roseburia RepID=D4KNW5_9FIRM
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000G1_scaffold_383_49
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37167..38126
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Roseburia RepID=C7GCX5_9FIRM
DNA-directed RNA polymerase subunit alpha
L1_008_000G1_scaffold_383_50
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


38417..38953
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=4 Tax=Roseburia RepID=D4KNW6_9FIRM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_51
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39235..39771
DNA (537bp) protein (179aa)
Uncharacterized conserved protein n=2 Tax=Roseburia intestinalis RepID=D4KNW7_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL08569.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_52
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39846..40199
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6AZR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54289.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_53
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40203..40475
DNA (273bp) protein (91aa)
Regulator of competence-specific genes n=2 Tax=Roseburia RepID=D4KUH1_9FIRM
Regulator of competence-specific genes
Regulator of competence-specific genes {ECO:0000313|EMBL:CDA54291.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_383_54
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40976..41416
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNX0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08572.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_55
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41483..42919)
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG59_9FIRM
Signal transduction histidine kinase
L1_008_000G1_scaffold_383_56
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42916..43620)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG58_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU99196.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000G1_scaffold_383_57
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43701..46127)
DNA (2427bp) protein (809aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Endonuclease MutS2 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNX3_9FIRM
MutS2 family protein
L1_008_000G1_scaffold_383_58
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46369..47883
DNA (1515bp) protein (505aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUG5_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBL11005.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_383_59
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48044..48994
DNA (951bp) protein (317aa)
Uncharacterized domain HDIG n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNX5_9FIRM
uncharacterized domain HDIG
Uncharacterized domain HDIG {ECO:0000313|EMBL:CBL08577.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_383_60
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48997..50424
DNA (1428bp) protein (476aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBL11002.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBL11002.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUG2_9FIRM
Displaying items 31-60 of 74 in total

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