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L1_008_000G1_scaffold_392

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_392_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2149
DNA (2148bp) protein (716aa)
magnesium chelatase (EC:6.6.1.1)
UPI0003D5E8E9 related cluster n=1 Tax=unknown RepID=UPI0003D5E8E9
Uncharacterized protein {ECO:0000313|EMBL:ETI93171.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_008_000G1_scaffold_392_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2173..4251
DNA (2079bp) protein (693aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D676E5 related cluster n=1 Tax=unknown RepID=UPI0003D676E5
topA; DNA topoisomerase I
L1_008_000G1_scaffold_392_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4425..5210
DNA (786bp) protein (262aa)
UPI0003D680D8 related cluster n=1 Tax=unknown RepID=UPI0003D680D8
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
transcriptional repressor CodY
L1_008_000G1_scaffold_392_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5302..6573
DNA (1272bp) protein (424aa)
ATPase, AAA family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN6_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EDQ96424.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATPase-like MgsA
L1_008_000G1_scaffold_392_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6718..7497
DNA (780bp) protein (260aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRC0_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA11356.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
acetyltransferase
L1_008_000G1_scaffold_392_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7685..8158
DNA (474bp) protein (158aa)
UPI0003D647CA related cluster n=1 Tax=unknown RepID=UPI0003D647CA
Uncharacterized protein {ECO:0000313|EMBL:ETI93166.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
RRF2 family transcriptional regulator
L1_008_000G1_scaffold_392_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8172..9371
DNA (1200bp) protein (400aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
iscS2; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN3_9FIRM
L1_008_000G1_scaffold_392_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9515..9955
DNA (441bp) protein (147aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=2 Tax=Clostridiales RepID=B0AAN2_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CDA11353.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
NifU-like protein
L1_008_000G1_scaffold_392_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10095..11183
DNA (1089bp) protein (363aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Clostridiales RepID=B0AAN1_9FIRM
L1_008_000G1_scaffold_392_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11574..14213
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Alanine--tRNA ligase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN0_9FIRM
alaS; alanyl-tRNA synthetase
L1_008_000G1_scaffold_392_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14286..14543
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96417.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_008_000G1_scaffold_392_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14648..16846
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XG05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11349.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
membrane protein
L1_008_000G1_scaffold_392_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17003..17428
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=B0AAM7_9FIRM
holliday junction resolvase
L1_008_000G1_scaffold_392_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17527..17808
DNA (282bp) protein (94aa)
UPF0473 protein CLOBAR_02181 n=2 Tax=Clostridiales RepID=B0AAM6_9FIRM
UPF0473 protein BN488_02374 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_008_000G1_scaffold_392_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17995..18438
DNA (444bp) protein (148aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridiales RepID=B0AAM5_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDQ96413.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
fur; ferric uptake regulation protein
L1_008_000G1_scaffold_392_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18691..20367
DNA (1677bp) protein (559aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11345.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ribonuclease J family protein
L1_008_000G1_scaffold_392_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20554..21705
DNA (1152bp) protein (384aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAM3_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDQ96411.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
D-alanyl-D-alanine carboxypeptidase
L1_008_000G1_scaffold_392_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21886..22485
DNA (600bp) protein (200aa)
Peptidase, M50 family {ECO:0000313|EMBL:EDQ96410.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDQ96410.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Peptidase, M50 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAM2_9FIRM
membrane-associated peptidase
L1_008_000G1_scaffold_392_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22486..23217
DNA (732bp) protein (244aa)
Segregation and condensation protein A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAM1_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
scpA; segregation and condensation protein A
L1_008_000G1_scaffold_392_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23219..23752
DNA (534bp) protein (178aa)
Segregation and condensation protein B n=2 Tax=Clostridiales RepID=B0AAM0_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
scpB; segregation and condensation protein B
L1_008_000G1_scaffold_392_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23773..23970
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11340.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_008_000G1_scaffold_392_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24067..24210)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93150.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_008_000G1_scaffold_392_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24407..24544
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11338.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_008_000G1_scaffold_392_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24686..25432)
DNA (747bp) protein (249aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
NAD-dependent protein deacetylase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAL6_9FIRM
NAD-dependent deacetylase
L1_008_000G1_scaffold_392_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25640..27301
DNA (1662bp) protein (554aa)
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC:3.2.1.96)
UPI0003D69045 related cluster n=1 Tax=unknown RepID=UPI0003D69045
Uncharacterized protein {ECO:0000313|EMBL:ETI93147.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_008_000G1_scaffold_392_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27342..28010)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0AAL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11335.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_008_000G1_scaffold_392_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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28182..32480
DNA (4299bp) protein (1433aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
DNA polymerase III polC-type n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAL3_9FIRM
DNA polymerase III PolC-type
L1_008_000G1_scaffold_392_28

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32717..33178
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=2 Tax=Clostridiales RepID=B0AAL2_9FIRM
Ribosome maturation factor RimP {ECO:0000313|EMBL:ETJ17025.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000G1_scaffold_392_29

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33208..34362
DNA (1155bp) protein (385aa)
Transcription termination factor NusA n=2 Tax=Clostridiales RepID=B0AAL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17026.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
nusA; Transcription elongation protein
L1_008_000G1_scaffold_392_30

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34393..34668
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17027.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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