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L1_008_000G1_scaffold_393

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_393_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..160)
DNA (159bp) protein (53aa)
PREDICTED: outer membrane protein A-like n=1 Tax=Ceratitis capitata RepID=UPI0003298DA7
ompA; outer membrane protein A
Outer membrane protein A {ECO:0000313|EMBL:AEW72978.1}; TaxID=1045856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae EcWSU1.;"
L1_008_000G1_scaffold_393_2
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440..940)
DNA (501bp) protein (167aa)
Cell division inhibitor SulA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YJH0_9ENTR
Cell division inhibitor SulA {ECO:0000256|HAMAP-Rule:MF_01179, ECO:0000256|SAAS:SAAS00088372}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
SOS cell division inhibitor
L1_008_000G1_scaffold_393_3
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1159..1779
DNA (621bp) protein (207aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Enterobacter cloacae RepID=UPI00036BBE8D
competence protein
Competence protein {ECO:0000313|EMBL:AHJ74453.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_000G1_scaffold_393_4
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1776..3905)
DNA (2130bp) protein (710aa)
Inner membrane protein yccS n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILK9_9ENTR
Inner membrane protein yccS {ECO:0000313|EMBL:EJI88212.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
membrane protein
L1_008_000G1_scaffold_393_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3922..4368)
DNA (447bp) protein (149aa)
Inner membrane protein yccF n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QA95_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE37475.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L1_008_000G1_scaffold_393_6
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4492..6546
DNA (2055bp) protein (685aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
DNA helicase IV n=1 Tax=Enterobacter sp. R4-368 RepID=R9VX43_9ENTR
helD; DNA helicase IV
L1_008_000G1_scaffold_393_7
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6576..7034)
DNA (459bp) protein (153aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
Methylglyoxal synthase n=3 Tax=Escherichia fergusonii RepID=MGSA_ESCF3
L1_008_000G1_scaffold_393_8
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7146..7808)
DNA (663bp) protein (221aa)
UPF0319 protein Entas_1469 n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S608_ENTAL
hypothetical protein
UPF0319 protein Entas_1469 {ECO:0000256|HAMAP-Rule:MF_00789}; Flags: Precursor;; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L1_008_000G1_scaffold_393_9
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7962..8375
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VT93_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN88002.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_000G1_scaffold_393_10
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8401..8718)
DNA (318bp) protein (106aa)
Heat shock protein hspQ n=1 Tax=Enterobacter sp. R4-368 RepID=R9VWK2_9ENTR
heat shock protein HspQ
Heat shock protein HspQ {ECO:0000256|HAMAP-Rule:MF_01194, ECO:0000256|SAAS:SAAS00016449}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_000G1_scaffold_393_11
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8779..9990)
DNA (1212bp) protein (404aa)
Ribosomal RNA large subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011825}; EC=2.1.1.191 {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011815};; 23S rRNA m5C1962 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01857}; rRNA (cytosine-C(5)-)-methyltransferase RlmI {ECO:0000256|HAMAP-Rule:MF_01857}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Ribosomal RNA large subunit methyltransferase I n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QA99_9ENTR
23S rRNA m(5)C1962 methyltransferase
L1_008_000G1_scaffold_393_12
Yokenella regensburgei, Yokenella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10200..10754
DNA (555bp) protein (185aa)
Raf-like protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z6M0_9ENTR
Raf-like protein {ECO:0000313|EMBL:EHM47174.1}; TaxID=1002368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yokenella.;" source="Yokenella regensburgei ATCC 43003.;"
ybcL; protein YbcL
L1_008_000G1_scaffold_393_13
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10711..11553
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z6M1_9ENTR
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAL47460.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_393_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11610..11903
DNA (294bp) protein (98aa)
Acylphosphatase {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553};; Acylphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01450}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Acylphosphatase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IMV9_9ENTR
acylphosphatase
L1_008_000G1_scaffold_393_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11900..12226)
DNA (327bp) protein (109aa)
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Sulfurtransferase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M9P6_9ENTR
sulfur transfer protein TusE
L1_008_000G1_scaffold_393_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12318..12977)
DNA (660bp) protein (220aa)
Uncharacterized protein n=502 Tax=Salmonella enterica I RepID=A9N6V4_SALPB
TEGT family carrier/transport protein
TEGT family carrier/transport protein {ECO:0000313|EMBL:CEV20573.1}; TaxID=90371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhimurium.;"
L1_008_000G1_scaffold_393_17
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13254..14882
DNA (1629bp) protein (543aa)
Periplasmic oligopeptide-binding protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILL9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43661.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
peptide ABC transporter substrate-binding protein
L1_008_000G1_scaffold_393_18
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15650..17203
DNA (1554bp) protein (518aa)
cellulose synthesis regulatory protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D296B
cellulose synthase
Cellulose synthase {ECO:0000313|EMBL:AIX73705.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;"
L1_008_000G1_scaffold_393_19
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17639..19114
DNA (1476bp) protein (492aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QES3_9ENTR
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHN50760.1}; TaxID=554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum (Erwinia carotovora).;"
putative flavoprotein involved in K+ transport
L1_008_000G1_scaffold_393_20
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19426..21060
DNA (1635bp) protein (545aa)
UPI00039CC396 related cluster n=1 Tax=unknown RepID=UPI00039CC396
extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACT04926.1}; Flags: Precursor;; TaxID=561229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
L1_008_000G1_scaffold_393_21
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21115..22059
DNA (945bp) protein (315aa)
peptide ABC transporter permease n=1 Tax=Erwinia carotovora RepID=UPI0001A44244
Peptide ABC transporter permease {ECO:0000313|EMBL:KGA22088.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;"
ABC transporter permease
L1_008_000G1_scaffold_393_22
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22056..22916
DNA (861bp) protein (287aa)
Inner membrane ABC transporter permease protein yddQ n=1 Tax=Pectobacterium sp. (strain SCC3193) RepID=K4FNL0_PECSS
ABC transporter permease protein
ABC transporter permease protein {ECO:0000313|EMBL:KHN89813.1}; TaxID=1507808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. actinidiae.;"
L1_008_000G1_scaffold_393_23
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22913..24568
DNA (1656bp) protein (552aa)
ABC transporter related n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DJ92_PECCP
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACT15191.1}; TaxID=561230 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
L1_008_000G1_scaffold_393_24
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24565..25719
DNA (1155bp) protein (385aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1507808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. actinidiae.;"
Uncharacterized peroxidase-related enzyme n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DJ94_PECCP
peroxidase-like protein
L1_008_000G1_scaffold_393_25
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25970..26713
DNA (744bp) protein (248aa)
L-cystine import ATP-binding protein TcyN n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YP22_9ENTR
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHN50761.1}; TaxID=554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum (Erwinia carotovora).;"
amino acid ABC transporter ATP-binding protein
L1_008_000G1_scaffold_393_26
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26724..27422
DNA (699bp) protein (233aa)
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QW08_9ENTR
amino acid ABC transporter permease
Amino acid ABC transporter permease {ECO:0000313|EMBL:KHN50737.1}; TaxID=554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum (Erwinia carotovora).;"
L1_008_000G1_scaffold_393_27
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27432..28187
DNA (756bp) protein (252aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=3 Tax=Klebsiella oxytoca RepID=H3LNM2_KLEOX
Amino acid ABC transporter permease {ECO:0000313|EMBL:KDE36287.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
amino acid ABC transporter permease
L1_008_000G1_scaffold_393_28
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28174..29019
DNA (846bp) protein (282aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ISE9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS45021.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
amino acid ABC transporter substrate-binding protein
L1_008_000G1_scaffold_393_29
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29038..29790
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QW09_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42597.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
glyoxalase-like domain protein
L1_008_000G1_scaffold_393_30
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29804..30607
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
NADP oxidoreductase coenzyme F420-dependent family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IR72_9ENTR
pyrroline-5-carboxylate reductase
Displaying items 1-30 of 60 in total

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