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L1_008_000G1_scaffold_399

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_399_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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374..1747
DNA (1374bp) protein (458aa)
Transporter, major facilitator family n=3 Tax=Pseudomonas RepID=I2BX18_PSEFL
major facilitator family transporter
Uncharacterized protein {ECO:0000313|EMBL:AFJ58801.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1808..2557)
DNA (750bp) protein (250aa)
Type IV pilus assembly protein, PilZ family n=3 Tax=Pseudomonas RepID=I2BNM8_PSEFL
type IV pilus assembly protein, PilZ family
Uncharacterized protein {ECO:0000313|EMBL:AFJ55861.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2654..3124)
DNA (471bp) protein (157aa)
FlgN family protein n=3 Tax=Pseudomonas RepID=I2BL20_PSEFL
FlgN family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54953.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3173..3496)
DNA (324bp) protein (108aa)
Putative negative regulator of flagellin synthesis FlgM n=2 Tax=Pseudomonas RepID=S6ISW2_9PSED
anti-sigma-28 factor FlgM
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3638..4333)
DNA (696bp) protein (232aa)
Flagella basal body P-ring formation protein FlgA n=2 Tax=Pseudomonas RepID=I2BZ42_PSEFL
flgA; flagella basal body P-ring formation protein FlgA
FlgA protein {ECO:0000313|EMBL:AFJ59525.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4477..5409
DNA (933bp) protein (311aa)
Response regulator receiver domain/CheW-like domain protein n=4 Tax=Pseudomonas RepID=I2BRJ8_PSEFL
response regulator receiver domain/CheW-like domain protein
Response regulator receiver domain/CheW-like domain protein {ECO:0000313|EMBL:EIK63487.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_399_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5452..6279
DNA (828bp) protein (276aa)
chemotaxis protein methyltransferase, CheR family (EC:2.1.1.80)
Uncharacterized protein {ECO:0000313|EMBL:AFJ56484.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AFJ56484.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Chemotaxis protein methyltransferase n=2 Tax=Pseudomonas RepID=I2BQF1_PSEFL
L1_008_000G1_scaffold_399_8
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6592..6999
DNA (408bp) protein (136aa)
Flagellar basal body rod protein FlgB n=5 Tax=Pseudomonas RepID=I2BVN3_PSEFL
flgB; flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_399_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7003..7446
DNA (444bp) protein (148aa)
Flagellar basal-body rod protein FlgC n=3 Tax=Pseudomonas RepID=I2BU26_PSEFL
flgC; flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7463..8188
DNA (726bp) protein (242aa)
Flagellar hook capping protein n=3 Tax=Pseudomonas RepID=I2BV80_PSEFL
flgD; flagellar hook capping protein
FlgD protein {ECO:0000313|EMBL:AFJ58163.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8220..9530
DNA (1311bp) protein (437aa)
Flagellar hook protein FlgE n=3 Tax=Pseudomonas RepID=I2BVV2_PSEFL
flgE; flagellar hook protein FlgE
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9681..10808
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6HD04_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10901..13795)
DNA (2895bp) protein (965aa)
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Ribonucleoside-diphosphate reductase n=4 Tax=Pseudomonas RepID=I2BWH1_PSEFL
L1_008_000G1_scaffold_399_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14656..15381
DNA (726bp) protein (242aa)
DNA-binding response regulator n=2 Tax=Pseudomonas RepID=I2BQK7_PSEFL
DNA-binding response regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15378..16988
DNA (1611bp) protein (537aa)
Putative two component system, sensor kinase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KRV6_9PSED
sensor histidine kinase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17068..17787)
DNA (720bp) protein (240aa)
pcpS; multifunctional 4'-phosphopantetheinyl transferase PcpS (EC:2.7.8.7)
Multifunctional 4'-phosphopantetheinyl transferase PcpS n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BM60_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17926..18234
DNA (309bp) protein (103aa)
Outer membrane protein H1, putative n=3 Tax=Pseudomonas RepID=I2BLV5_PSEFL
oprH; outer membrane protein H1
OprH protein {ECO:0000313|EMBL:AFJ55238.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18253..18930
DNA (678bp) protein (226aa)
DNA-binding response regulator PhoP n=4 Tax=Pseudomonas RepID=I2BSG6_PSEFL
phoP; DNA-binding response regulator PhoP
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..20273
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Two-component system sensor kinase n=2 Tax=Pseudomonas RepID=S6ISU7_9PSED
phoQ; sensor protein PhoQ
L1_008_000G1_scaffold_399_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20402..21400)
DNA (999bp) protein (333aa)
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas RepID=I2BVT2_PSEFL
AraC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ58365.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21739..23070
DNA (1332bp) protein (444aa)
C4-dicarboxylate transport protein n=5 Tax=Pseudomonas RepID=I2BU45_PSEFL
dctA; aerobic C4-dicarboxylate transport protein
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23204..24190
DNA (987bp) protein (329aa)
XdhC/CoxI family protein n=2 Tax=Pseudomonas RepID=I2BZV6_PSEFL
XdhC/CoxI family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59789.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24193..24771
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KI27_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25329..28535)
DNA (3207bp) protein (1069aa)
rne; ribonuclease E (EC:3.1.26.12)
Ribonuclease E n=1 Tax=Pseudomonas sp. CF150 RepID=S6KRU6_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29245..30204
DNA (960bp) protein (320aa)
rluC; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Pseudouridine synthase n=3 Tax=Pseudomonas RepID=I2BYI4_PSEFL
L1_008_000G1_scaffold_399_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30191..30853
DNA (663bp) protein (221aa)
HAD hydrolase, family IA, variant 1 n=3 Tax=Pseudomonas RepID=I2BST0_PSEFL
HAD hydrolase
Uncharacterized protein {ECO:0000313|EMBL:AFJ57313.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30875..31858
DNA (984bp) protein (328aa)
signal peptide peptidase SppA, 36K type (EC:3.4.21.-)
Signal peptide peptidase SppA, 36K type, putative n=2 Tax=Pseudomonas RepID=I2BLQ3_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_399_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31990..32568)
DNA (579bp) protein (193aa)
Maf-like protein maf_1 n=2 Tax=Pseudomonas RepID=I2BWX1_PSEFL
maf_1; septum formation protein Maf
Maf-like protein maf_1 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32674..33204
DNA (531bp) protein (177aa)
Uncharacterized protein n=5 Tax=Pseudomonas RepID=I2BL84_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55017.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_399_30
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33218..33400
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=46 Tax=Pseudomonas RepID=RL32_PSEF5
50s ribosomal protein l32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
Displaying items 1-30 of 55 in total

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