ggKbase home page

L1_008_000G1_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_415_1
unknown

Not on your lists

105..206
DNA (102bp) protein (34aa)

This feature has no annotations

L1_008_000G1_scaffold_415_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

378..1664
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003476963
Uncharacterized protein {ECO:0000313|EMBL:EMZ13573.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L1_008_000G1_scaffold_415_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1799..2791)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D2I3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK68635.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_008_000G1_scaffold_415_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2958..3323)
DNA (366bp) protein (122aa)
Lipoprotein n=2 Tax=Bacteroidales RepID=D7IQI6_9BACE
Lipoprotein {ECO:0000313|EMBL:EFI09674.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L1_008_000G1_scaffold_415_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3333..4439)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=I8XJU6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKN24912.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
putative bacteriophage integrase
L1_008_000G1_scaffold_415_6
Prevotella timonensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4524..5420)
DNA (897bp) protein (299aa)
DNA-binding protein n=1 Tax=Bacteroides gallinarum RepID=UPI00037C8B16
DNA-binding protein {ECO:0000313|EMBL:KGI21359.1}; TaxID=1401062 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella timonensis S9-PR14.;"
DNA binding domain, excisionase family
L1_008_000G1_scaffold_415_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5668..7065)
DNA (1398bp) protein (466aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA modification GTPase MnmE n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBP9_9BACE
tRNA modification GTPase trmE
L1_008_000G1_scaffold_415_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7132..7785
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1M6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22738.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L1_008_000G1_scaffold_415_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7864..8055
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQX5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22739.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L1_008_000G1_scaffold_415_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8136..8795
DNA (660bp) protein (220aa)
NAD dependent epimerase/dehydratase family protein n=2 Tax=Bacteroides caccae RepID=A5ZGJ7_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDM20556.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_415_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8932..9810)
DNA (879bp) protein (293aa)
Phosphorylase family n=2 Tax=Bacteroides caccae RepID=A5ZGJ8_9BACE
Phosphorylase family {ECO:0000313|EMBL:EDM20557.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
purine nucleoside phosphorylase II
L1_008_000G1_scaffold_415_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9968..10969)
DNA (1002bp) protein (334aa)
UPF0365 protein BACCAC_02017 n=4 Tax=root RepID=A5ZGJ9_9BACE
UPF0365 protein BN535_00108 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_415_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10992..11462)
DNA (471bp) protein (157aa)
Nodulation efficiency protein D n=3 Tax=Bacteroides RepID=A5ZGK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72112.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_415_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11478..12899)
DNA (1422bp) protein (474aa)
WD40-like protein n=2 Tax=Bacteroides RepID=A5ZGK1_9BACE
WD40-like protein {ECO:0000313|EMBL:CCZ72111.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
WD40-like Beta Propeller Repeat.
L1_008_000G1_scaffold_415_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13083..13829
DNA (747bp) protein (249aa)
PP-loop family protein n=2 Tax=Bacteroides RepID=A5ZGK2_9BACE
PP-loop family protein {ECO:0000313|EMBL:CCZ72110.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L1_008_000G1_scaffold_415_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13845..14216
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72109.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_415_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14362..15378)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8VBQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72108.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_008_000G1_scaffold_415_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15415..15996)
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UTQ7_9BACE
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein
L1_008_000G1_scaffold_415_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16003..16803)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGK6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22749.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_415_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17311..18261)
DNA (951bp) protein (317aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDM20567.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM20567.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bacteroides RepID=A5ZGK8_9BACE
Glycosyltransferases involved in cell wall biogenesis
L1_008_000G1_scaffold_415_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18292..18807)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0Z4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22751.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_415_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19296..20381)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73884.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_415_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20389..20802)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1N9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22753.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_415_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20799..21362)
DNA (564bp) protein (188aa)
Sigma-70 region 2 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYV3_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ73882.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L1_008_000G1_scaffold_415_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21497..22777)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=2 Tax=Bacteroides RepID=I8V8J8_9BACE
L1_008_000G1_scaffold_415_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22958..23620)
DNA (663bp) protein (221aa)
Pentapeptide repeat protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGL4_9BACE
Pentapeptide repeat protein {ECO:0000313|EMBL:EDM20573.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_415_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23639..24016)
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=3 Tax=Bacteroides RepID=A5ZGL5_9BACE
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
camphor resistance protein CrcB
L1_008_000G1_scaffold_415_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24434..25843
DNA (1410bp) protein (470aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=2 Tax=Bacteroides RepID=A5ZGL6_9BACE
L1_008_000G1_scaffold_415_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25966..27189
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
peptidase T. Metallo peptidase. MEROPS family M20B (EC:3.4.11.4)
Peptidase T n=2 Tax=Bacteroides caccae RepID=A5ZGL7_9BACE
L1_008_000G1_scaffold_415_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27252..28337
DNA (1086bp) protein (362aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=3 Tax=Bacteroides RepID=A5ZGL8_9BACE
Displaying items 1-30 of 57 in total

View Taxonomy