ggKbase home page

L1_008_000G1_scaffold_420

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_420_1
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63..776
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19083.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_008_000G1_scaffold_420_2
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(838..2625)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19082.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_008_000G1_scaffold_420_3
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2660..4546)
DNA (1887bp) protein (629aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYW3_9BACE
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EFA19081.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_008_000G1_scaffold_420_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4903..8007
DNA (3105bp) protein (1035aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ERC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE05011.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
two-component hybrid sensor kinase/response regulator
L1_008_000G1_scaffold_420_5
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8092..10188
DNA (2097bp) protein (699aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Bacteroides sp. D20 RepID=D2EYW0_9BACE
L1_008_000G1_scaffold_420_6
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10211..10798)
DNA (588bp) protein (196aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=7 Tax=Bacteroides RepID=A7V6P7_BACUN
L1_008_000G1_scaffold_420_7
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10808..11266)
DNA (459bp) protein (153aa)
Sporulation and cell division repeat protein n=6 Tax=Bacteroides RepID=A7V6P6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV25953.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Sporulation domain-containing protein
L1_008_000G1_scaffold_420_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11368..12123)
DNA (756bp) protein (252aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=5 Tax=Bacteroides RepID=A7V6P4_BACUN
L1_008_000G1_scaffold_420_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12174..13466)
DNA (1293bp) protein (431aa)
DoxX family protein n=3 Tax=Bacteroides uniformis RepID=A7V6P3_BACUN
DoxX family protein {ECO:0000313|EMBL:KDS50117.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L1_008_000G1_scaffold_420_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13456..13998)
DNA (543bp) protein (181aa)
Uncharacterized protein n=5 Tax=root RepID=A7V6P2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS50118.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L1_008_000G1_scaffold_420_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14108..14977)
DNA (870bp) protein (290aa)
Peptidase, M23 family n=6 Tax=Bacteroides RepID=A7V6P1_BACUN
Peptidase family M23 {ECO:0000313|EMBL:EFV25957.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
peptidase M23
L1_008_000G1_scaffold_420_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14990..15115)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V6P0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS50121.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L1_008_000G1_scaffold_420_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15247..17343)
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDO53237.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDO53237.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=5 Tax=Bacteroides RepID=A7V6N9_BACUN
L1_008_000G1_scaffold_420_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17331..18005)
DNA (675bp) protein (225aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Bacteroides uniformis RepID=I8ZWM0_BACUN
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_008_000G1_scaffold_420_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18040..18594)
DNA (555bp) protein (185aa)
DJ-1 family protein n=6 Tax=Bacteroides RepID=A7V6N7_BACUN
DJ-1 family protein {ECO:0000313|EMBL:EIY83639.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
DJ-1 family protein
L1_008_000G1_scaffold_420_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18609..19427)
DNA (819bp) protein (273aa)
TonB family domain protein n=6 Tax=Bacteroides RepID=A7V6N6_BACUN
TonB family domain-containing protein {ECO:0000313|EMBL:EIY83638.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
TonB family protein
L1_008_000G1_scaffold_420_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19462..19872)
DNA (411bp) protein (137aa)
Biopolymer transporter ExbD/TolR n=6 Tax=Bacteroides RepID=E5VB65_9BACE
Biopolymer transporter ExbD/TolR {ECO:0000313|EMBL:EFV25962.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Biopolymer transport protein ExbD/TolR
L1_008_000G1_scaffold_420_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19907..20623)
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=Bacteroides uniformis RepID=I9J0W7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83636.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
outer membrane transport energization protein ExbB
L1_008_000G1_scaffold_420_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20623..21336)
DNA (714bp) protein (238aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=5 Tax=root RepID=A7V6N2_BACUN
L1_008_000G1_scaffold_420_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21441..22310
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Bacteroides RepID=D2EYU6_9BACE
ATP-NAD/AcoX kinase
L1_008_000G1_scaffold_420_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22750..23331
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroides RepID=A7V6D7_BACUN
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY83633.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
RNA polymerase ECF-type sigma factor
L1_008_000G1_scaffold_420_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23349..24389
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HXK9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS08654.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
anti-sigma factor
L1_008_000G1_scaffold_420_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24603..26765
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I5P0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS08655.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
L1_008_000G1_scaffold_420_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26813..28876
DNA (2064bp) protein (688aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZXT7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83628.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Alpha-galactosidase
L1_008_000G1_scaffold_420_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28890..30182
DNA (1293bp) protein (431aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A8D6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83627.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Acetyl esterase (deacetylase)
L1_008_000G1_scaffold_420_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30197..32191
DNA (1995bp) protein (665aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9J0X4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83626.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
glycoside hydrolase
L1_008_000G1_scaffold_420_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32249..34027
DNA (1779bp) protein (593aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.31)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZWN5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83625.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L1_008_000G1_scaffold_420_28
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34048..36744
DNA (2697bp) protein (899aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYT9_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFA19057.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Beta-galactosidase/beta-glucuronidase
L1_008_000G1_scaffold_420_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36756..37526
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HXY3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS08661.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L1_008_000G1_scaffold_420_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37633..39843
DNA (2211bp) protein (737aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A8C9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY83622.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Displaying items 1-30 of 37 in total

View Taxonomy