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L1_008_000G1_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_437_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..351)
DNA (351bp) protein (117aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9L1_9FIRM
L1_008_000G1_scaffold_437_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(344..985)
DNA (642bp) protein (214aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5Q8_9FIRM
hypothetical protein
L1_008_000G1_scaffold_437_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(998..1786)
DNA (789bp) protein (263aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRR0_9FIRM
L1_008_000G1_scaffold_437_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1823..2392)
DNA (570bp) protein (190aa)
Anthranilate synthase component II n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB97_9FIRM
Anthranilate synthase component II {ECO:0000313|EMBL:CDA24140.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
anthranilate synthase component II
L1_008_000G1_scaffold_437_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..3859)
DNA (1410bp) protein (470aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHC4_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:CDA24139.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_437_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4379..5164)
DNA (786bp) protein (262aa)
Ketoacyl reductase putative n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRQ6_9FIRM
Ketoacyl reductase putative {ECO:0000313|EMBL:CDA24136.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ketoacyl reductase, putative
L1_008_000G1_scaffold_437_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5161..5622)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24135.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5718..6983)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24134.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7132..7704)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24133.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7742..8545)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24132.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_437_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8689..9360)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24131.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_437_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9341..9862)
DNA (522bp) protein (174aa)
Signal peptidase I n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB90_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CDA24130.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
signal peptidase I
L1_008_000G1_scaffold_437_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9891..14333)
DNA (4443bp) protein (1481aa)
Fibro-slime domain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHB5_9FIRM
Fibro-slime domain {ECO:0000313|EMBL:CDA24129.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14507..15706)
DNA (1200bp) protein (400aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLC9_9FIRM
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:CDA25454.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA-binding transcriptional activator of the SARP family
L1_008_000G1_scaffold_437_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15849..16718)
DNA (870bp) protein (290aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Methylenetetrahydrofolate reductase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF19_9FIRM
5,10-methylenetetrahydrofolate reductase
L1_008_000G1_scaffold_437_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16746..17249)
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVI2_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Transcription elongation factor
L1_008_000G1_scaffold_437_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17325..17966)
DNA (642bp) protein (214aa)
Phosphopantetheine-protein transferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9J6_9FIRM
Phosphopantetheine-protein transferase {ECO:0000313|EMBL:CDA25457.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
phosphopantetheine-protein transferase
L1_008_000G1_scaffold_437_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17959..18825)
DNA (867bp) protein (289aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD54_9FIRM
L1_008_000G1_scaffold_437_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18850..19737)
DNA (888bp) protein (296aa)
EDD domain protein DegV family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLD4_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDA25459.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
EDD domain protein, DegV family
L1_008_000G1_scaffold_437_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19864..20016
DNA (153bp) protein (51aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF26_9FIRM
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:CDA25460.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20056..21558)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25461.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_437_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21663..22931)
DNA (1269bp) protein (423aa)
Predicted carboxypeptidase (EC:3.4.19.11)
Predicted carboxypeptidase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9K2_9FIRM
Predicted carboxypeptidase {ECO:0000313|EMBL:CDA25462.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_437_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23088..24158)
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD60_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
bacterial peptide chain release factor 1 (bRF-1)
L1_008_000G1_scaffold_437_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24216..25046)
DNA (831bp) protein (277aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Release factor glutamine methyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLE1_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L1_008_000G1_scaffold_437_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25043..25987)
DNA (945bp) protein (315aa)
Predicted metal-dependent enzyme n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF32_9FIRM
Predicted metal-dependent enzyme {ECO:0000313|EMBL:CDA25465.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted metal-dependent enzyme
L1_008_000G1_scaffold_437_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26152..26352)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=6 Tax=Clostridiales RepID=C4Z908_EUBR3
ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000G1_scaffold_437_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26612..28063)
DNA (1452bp) protein (484aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Transcription termination factor Rho n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9K7_9FIRM
transcription termination factor Rho
L1_008_000G1_scaffold_437_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28242..29393
DNA (1152bp) protein (384aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD67_9FIRM
Malic enzyme {ECO:0000313|EMBL:CDA25468.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_437_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29338..30354
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25469.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
radical SAM protein, TIGR01212 family
L1_008_000G1_scaffold_437_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30370..30885
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25470.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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