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L1_008_000G1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_447_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(70..1572)
DNA (1503bp) protein (501aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=A5ZGE9_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21259.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
frrG; putative outer membrane protein
L1_008_000G1_scaffold_447_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1824..2840)
DNA (1017bp) protein (339aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=A5ZGE8_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDM21258.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+-dicitrate sensor, membrane component
L1_008_000G1_scaffold_447_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2976..3551
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=A5ZGE7_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72392.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L1_008_000G1_scaffold_447_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3560..5455)
DNA (1896bp) protein (632aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGE6_9BACE
two-component system sensor histidine kinase
L1_008_000G1_scaffold_447_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5572..8208)
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=root RepID=A5ZGE5_9BACE
L1_008_000G1_scaffold_447_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8272..8910)
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=root RepID=A5ZGE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21254.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_447_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9060..10103
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22572.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_447_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10176..10964
DNA (789bp) protein (263aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S5_9BACE
MazG family protein {ECO:0000313|EMBL:CCZ72398.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_447_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11074..11538)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V804_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72399.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_447_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11566..11976)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72400.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_447_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11994..12545)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=2 Tax=Bacteroides RepID=A5ZGD8_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ72401.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L1_008_000G1_scaffold_447_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12573..14090)
DNA (1518bp) protein (506aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=A5ZGD7_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21247.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_447_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14107..15045)
DNA (939bp) protein (313aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S9_9BACE
L1_008_000G1_scaffold_447_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15238..17034)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=2 Tax=Bacteroides caccae RepID=A5ZGD5_9BACE
30S ribosomal protein S1 {ECO:0000313|EMBL:EDM21245.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpsA; 30S ribosomal protein S1
L1_008_000G1_scaffold_447_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17146..23097
DNA (5952bp) protein (1984aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21244.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF3320).
L1_008_000G1_scaffold_447_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23094..24224)
DNA (1131bp) protein (377aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3R1_9BACE
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CCZ72645.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_447_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24427..26538)
DNA (2112bp) protein (704aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72644.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_447_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26984..29173
DNA (2190bp) protein (730aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDM21240.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDM21240.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=3 Tax=Bacteroides RepID=A5ZGD0_9BACE
L1_008_000G1_scaffold_447_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29305..29991
DNA (687bp) protein (229aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZGC9_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDM21239.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_008_000G1_scaffold_447_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30028..30582
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor, expansion family 1 n=3 Tax=Bacteroides RepID=I9EQE5_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72641.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase subunit sigma-70
L1_008_000G1_scaffold_447_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30592..31806
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72640.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
L1_008_000G1_scaffold_447_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32034..35402
DNA (3369bp) protein (1123aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides caccae RepID=I8VB94_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21236.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Outer membrane receptor proteins, mostly Fe transport
L1_008_000G1_scaffold_447_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35414..36970
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3G0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72638.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
SusD family.
L1_008_000G1_scaffold_447_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37007..38050
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22555.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_447_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38089..39102
DNA (1014bp) protein (338aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDM21233.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDM21233.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides RepID=A5ZGC3_9BACE
Peroxiredoxin
L1_008_000G1_scaffold_447_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39136..40851
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72635.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Subtilisin-like serine proteases
L1_008_000G1_scaffold_447_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40853..42019
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21231.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_447_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42033..43328
DNA (1296bp) protein (432aa)
Thioredoxin n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0E7_9BACE
Thioredoxin {ECO:0000313|EMBL:EIY22551.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Thioredoxin domain-containing protein
L1_008_000G1_scaffold_447_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44394..45710
DNA (1317bp) protein (439aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WR16_BACF6
putative bacteriophage integrase
Putative bacteriophage integrase {ECO:0000313|EMBL:CBW21784.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L1_008_000G1_scaffold_447_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45726..47057
DNA (1332bp) protein (444aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WR15_BACF6
putative bacteriophage integrase
Putative bacteriophage integrase {ECO:0000313|EMBL:CBW21783.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Displaying items 1-30 of 34 in total

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