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L1_008_000G1_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_469_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(462..2171)
DNA (1710bp) protein (570aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB04_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKQ56214.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
methyl-accepting chemotaxis sensory transducer
L1_008_000G1_scaffold_469_2
unknown

Not on your lists

2357..2596
DNA (240bp) protein (80aa)

This feature has no annotations

L1_008_000G1_scaffold_469_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2619..3341
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDR7_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36997.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000G1_scaffold_469_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3359..4669
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDS3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37003.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000G1_scaffold_469_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4813..10002
DNA (5190bp) protein (1730aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T817_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EGD49615.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Cna B domain-containing protein
L1_008_000G1_scaffold_469_6
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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10089..10688
DNA (600bp) protein (200aa)
Sortase family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJ03_9FIRM
Sortase family protein {ECO:0000313|EMBL:ERI94607.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
srta; sortase
L1_008_000G1_scaffold_469_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10786..11328
DNA (543bp) protein (181aa)
UPI0003D63629 related cluster n=1 Tax=unknown RepID=UPI0003D63629
Rubrerythrin {ECO:0000313|EMBL:ETI89242.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rubrerythrin
L1_008_000G1_scaffold_469_8
unknown

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11341..11601
DNA (261bp) protein (87aa)

This feature has no annotations

L1_008_000G1_scaffold_469_9
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11859..12335
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LQX8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD71053.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L1_008_000G1_scaffold_469_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12271..12792)
DNA (522bp) protein (174aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AGF58887.1}; EC=2.7.8.8 {ECO:0000313|EMBL:AGF58887.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N653_9CLOT
L1_008_000G1_scaffold_469_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13032..13910
DNA (879bp) protein (293aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY0_CLOB8
putative lipid kinase
Putative lipid kinase {ECO:0000313|EMBL:AJG97269.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L1_008_000G1_scaffold_469_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13962..14612
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW69_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45019.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_469_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14661..15209)
DNA (549bp) protein (183aa)
UPI0003D5921C related cluster n=1 Tax=unknown RepID=UPI0003D5921C
Uncharacterized protein {ECO:0000313|EMBL:KJZ87538.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L1_008_000G1_scaffold_469_14
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15316..17280)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3E4_CLOPA
UPF0313 protein X276_04730 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L1_008_000G1_scaffold_469_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17978..19225
DNA (1248bp) protein (416aa)
MgtE intracellular region n=1 Tax=Clostridium sp. DL-VIII RepID=G7M747_9CLOT
MgtE intracellular region {ECO:0000313|EMBL:EHJ01878.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
MgtE integral membrane protein
L1_008_000G1_scaffold_469_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19728..20639
DNA (912bp) protein (304aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cysK2; cysteine synthase CysK (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M746_9CLOT
L1_008_000G1_scaffold_469_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20683..21273
DNA (591bp) protein (197aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Serine acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1R132_CLOBU
serine O-acetyltransferase
L1_008_000G1_scaffold_469_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21284..22282
DNA (999bp) protein (333aa)
Iron-sulfur cluster-binding protein n=4 Tax=Clostridium butyricum RepID=B1R133_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31051.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
iron-sulfur cluster-binding protein
L1_008_000G1_scaffold_469_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22458..23162
DNA (705bp) protein (235aa)
plsD; glycerol-3-phosphate O-acyltransferase PlsD (EC:2.3.1.15)
Glycerol-3-phosphate O-acyltransferase n=2 Tax=Clostridium butyricum RepID=M8KB41_CLOBU
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:ENZ31050.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L1_008_000G1_scaffold_469_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23175..23813
DNA (639bp) protein (213aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Endonuclease III n=3 Tax=Clostridium butyricum RepID=B1R135_CLOBU
L1_008_000G1_scaffold_469_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24059..24967
DNA (909bp) protein (303aa)
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
D-alanine--D-alanine ligase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=DDL_CLOB8
ddl; D-alanine--D-alanine ligase
L1_008_000G1_scaffold_469_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25105..26481)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Histidine kinase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3D3_CLOPA
integral membrane sensor signal transduction histidine kinase
L1_008_000G1_scaffold_469_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26579..27292)
DNA (714bp) protein (238aa)
Response regulator (CheY-like receiver and winged-helix DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7N5_9CLOT
Response regulator (CheY-like receiver and winged-helix DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ58151.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
two component transcriptional regulator
L1_008_000G1_scaffold_469_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27539..28483
DNA (945bp) protein (315aa)
Glycoside hydrolase family 25 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW62_CLOSA
Muramidase {ECO:0000313|EMBL:KHD14201.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glycoside hydrolase family 25
L1_008_000G1_scaffold_469_25
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28635..30119
DNA (1485bp) protein (495aa)
VanW family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQZ9_CLOB8
VanW family protein
VanW family protein {ECO:0000313|EMBL:ABR32779.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_008_000G1_scaffold_469_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30334..30795
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA94_9CLOT
tRNA/rRNA methyltransferase SpoU
L1_008_000G1_scaffold_469_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30812..31648
DNA (837bp) protein (279aa)
DegV domain-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZB9_CLOSA
DegV domain-containing protein
DegV domain-containing protein {ECO:0000313|EMBL:AGX45006.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_469_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31846..33219
DNA (1374bp) protein (458aa)
Putative RNA polymerase sigma-54 factor RpoN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWP1_CLOSA
rpoN; putative RNA polymerase sigma-54 factor RpoN
Putative RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:AGX45005.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_469_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33385..34413
DNA (1029bp) protein (343aa)
Transcription regulator n=3 Tax=Clostridium butyricum RepID=B1R144_CLOBU
Transcriptional regulator, SorC family {ECO:0000313|EMBL:EEP55075.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
DeoR family transcriptional regulator
L1_008_000G1_scaffold_469_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34491..35492
DNA (1002bp) protein (334aa)
gap; glyceraldehyde-3-phosphate dehydrogenase Gap (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Glyceraldehyde-3-phosphate dehydrogenase Gap n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWU7_CLOSA
Displaying items 1-30 of 42 in total

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