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L1_008_000G1_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_481_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(730..1776)
DNA (1047bp) protein (349aa)
Uncharacterized conserved protein n=2 Tax=Roseburia intestinalis RepID=D4KTB6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10118.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_481_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1922..2149)
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GCM4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13331.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_481_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2150..2332)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTB4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10116.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_481_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2480..3358)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GCM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53915.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_481_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3460..4494)
DNA (1035bp) protein (345aa)
HD domain protein n=2 Tax=Roseburia RepID=C7GCM1_9FIRM
Putative HD domain protein {ECO:0000313|EMBL:CDA56105.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
HD-GYP domain
L1_008_000G1_scaffold_481_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4522..5043)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B507_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13329.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000G1_scaffold_481_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5091..6017)
DNA (927bp) protein (309aa)
ParB-like partition proteins n=2 Tax=Roseburia RepID=D4KTB1_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CDA56103.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_481_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6010..6777)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Roseburia RepID=C7GCL8_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDA56102.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ATPases involved in chromosome partitioning
L1_008_000G1_scaffold_481_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8509..9150)
DNA (642bp) protein (214aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Roseburia RepID=D4KTA9_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDA56099.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_481_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9166..10170)
DNA (1005bp) protein (335aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase n=2 Tax=Roseburia RepID=D4KZW9_9FIRM
L1_008_000G1_scaffold_481_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10345..11316
DNA (972bp) protein (324aa)
Hydrolase alpha/beta fold family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BS49_9FIRM
Hydrolase alpha/beta fold family {ECO:0000313|EMBL:CDA56097.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_481_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11496..12212)
DNA (717bp) protein (239aa)
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Roseburia RepID=D4KZX0_9FIRM
L1_008_000G1_scaffold_481_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12319..14292)
DNA (1974bp) protein (658aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYG2_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glucose-inhibited division protein A
L1_008_000G1_scaffold_481_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14342..15715)
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tRNA modification GTPase MnmE n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCL2_9FIRM
tRNA modification GTPase trmE
L1_008_000G1_scaffold_481_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15812..16438)
DNA (627bp) protein (209aa)
Predicted RNA-binding protein n=4 Tax=Roseburia RepID=D4KTA3_9FIRM
Predicted RNA-binding protein
Predicted RNA-binding protein {ECO:0000313|EMBL:CDA56092.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_481_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16461..17762)
DNA (1302bp) protein (434aa)
Membrane protein insertase YidC/Oxa1 family C-terminal domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BAJ8_9FIRM
Membrane protein insertase YidC/Oxa1 family C-terminal domain {ECO:0000313|EMBL:CDA56091.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L1_008_000G1_scaffold_481_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18015..18353)
DNA (339bp) protein (113aa)
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Ribonuclease P protein component n=4 Tax=Roseburia RepID=D4KTA2_9FIRM
L1_008_000G1_scaffold_481_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19288..20703
DNA (1416bp) protein (472aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Roseburia RepID=D4KTA0_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
chromosomal replication initiator protein DnaA
L1_008_000G1_scaffold_481_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21041..22153
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Roseburia RepID=C7GCK5_9FIRM
L1_008_000G1_scaffold_481_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22217..22432
DNA (216bp) protein (72aa)
S4 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCK4_9FIRM
S4 domain protein {ECO:0000313|EMBL:EEV00441.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000G1_scaffold_481_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22429..23535
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT97_9FIRM
recF protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000G1_scaffold_481_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23540..25477
DNA (1938bp) protein (646aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
DNA gyrase subunit B n=3 Tax=Roseburia intestinalis RepID=D4KT96_9FIRM
L1_008_000G1_scaffold_481_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25567..28191
DNA (2625bp) protein (875aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA gyrase subunit A n=4 Tax=Roseburia RepID=D4KT95_9FIRM
L1_008_000G1_scaffold_481_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28225..29316
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B4Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56079.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_481_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29354..30289
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56078.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000G1_scaffold_481_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30262..31194
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HR66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30624.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Helix-turn-helix.
L1_008_000G1_scaffold_481_27
unknown

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comp(31198..31347)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000G1_scaffold_481_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31519..31644
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BAI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56076.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000G1_scaffold_481_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31708..32898
DNA (1191bp) protein (397aa)
Radical SAM domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYE8_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDA56075.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
radical SAM protein
L1_008_000G1_scaffold_481_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32891..33793
DNA (903bp) protein (301aa)
carboxy-processing protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BE48_9FIRM
Carboxyl-terminal protease {ECO:0000313|EMBL:CDA57356.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 42 in total

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