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L1_008_000G1_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_486_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..595
DNA (594bp) protein (198aa)
ATP-dependent chaperone ClpB n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8I1_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
heat shock protein ClpB-like protein
L1_008_000G1_scaffold_486_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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842..2170
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79669.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L1_008_000G1_scaffold_486_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2230..3516
DNA (1287bp) protein (429aa)
Aspartate aminotransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YK98_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:CDA25079.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
aspartate aminotransferase
L1_008_000G1_scaffold_486_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3645..4667
DNA (1023bp) protein (341aa)
Methyl-accepting chemotaxis protein McpD n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDZ8_9FIRM
Methyl-accepting chemotaxis protein McpD {ECO:0000313|EMBL:CDA25080.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
mcpD; methyl-accepting chemotaxis protein McpD
L1_008_000G1_scaffold_486_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4867..5046
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79667.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_000G1_scaffold_486_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5047..6117
DNA (1071bp) protein (357aa)
Component of type IV pilus n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE02_9FIRM
Component of type IV pilus {ECO:0000313|EMBL:CDA25085.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Flp pilus assembly protein, ATPase CpaF
L1_008_000G1_scaffold_486_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6110..7501
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25086.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_486_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7534..7920
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25087.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7960..8070
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25088.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8067..8207
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25089.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8209..8406
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25090.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8403..8576
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25091.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8573..9862)
DNA (1290bp) protein (430aa)
CBS domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8J0_9FIRM
CBS domain protein {ECO:0000313|EMBL:CDA25092.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative hemolysin-like protein
L1_008_000G1_scaffold_486_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9908..11365)
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC45_9FIRM
inosine-5-monophosphate dehydrogenase
L1_008_000G1_scaffold_486_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11747..12553
DNA (807bp) protein (269aa)
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKB2_9FIRM
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CDA25094.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
APG10 (albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase
L1_008_000G1_scaffold_486_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12586..13917
DNA (1332bp) protein (444aa)
Glutamine synthetase type I n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE08_9FIRM
Glutamine synthetase type I {ECO:0000313|EMBL:CDA25095.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
glutamine synthetase, type I
L1_008_000G1_scaffold_486_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13942..14505
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25096.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_486_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14660..15874
DNA (1215bp) protein (405aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
LL-diaminopimelate aminotransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8J4_9FIRM
L,L-diaminopimelate aminotransferase
L1_008_000G1_scaffold_486_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15995..16693
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25098.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_486_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16746..17924
DNA (1179bp) protein (393aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKB7_9FIRM
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities {ECO:0000313|EMBL:CDA25099.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_486_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18007..18699
DNA (693bp) protein (231aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE12_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDA25100.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
two-component response regulator
L1_008_000G1_scaffold_486_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18696..21149
DNA (2454bp) protein (818aa)
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUI7_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDA25101.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Signal transduction histidine kinase
L1_008_000G1_scaffold_486_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21234..22595
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25102.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_486_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22603..24057
DNA (1455bp) protein (485aa)
Cation transport protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC55_9FIRM
Cation transport protein {ECO:0000313|EMBL:CDA25103.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Trk-type K+ transport systems, membrane components
L1_008_000G1_scaffold_486_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24075..25583
DNA (1509bp) protein (503aa)
Porphobilinogen deaminase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNV1_9FIRM
Porphobilinogen deaminase {ECO:0000313|EMBL:CCZ79745.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
porphobilinogen deaminase
L1_008_000G1_scaffold_486_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25580..27811
DNA (2232bp) protein (744aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Primosomal protein N (Replication factor Y)-superfamily II helicase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE15_9FIRM
primosomal protein N (replication factor Y) - superfamily II helicase
L1_008_000G1_scaffold_486_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27822..28307
DNA (486bp) protein (162aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUJ4_9FIRM
L1_008_000G1_scaffold_486_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28326..29243
DNA (918bp) protein (306aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Methionyl-tRNA formyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8K0_9FIRM
methionyl-tRNA formyltransferase
L1_008_000G1_scaffold_486_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29256..29954
DNA (699bp) protein (233aa)
Predicted Zn-dependent protease n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC59_9FIRM
Predicted Zn-dependent protease {ECO:0000313|EMBL:CDA25108.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative Zn-dependent protease
L1_008_000G1_scaffold_486_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29947..31236
DNA (1290bp) protein (430aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKC4_9FIRM
Displaying items 1-30 of 44 in total

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