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L1_008_000G1_scaffold_519

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_519_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(894..1496)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23423.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
formate/nitrite transporter
L1_008_000G1_scaffold_519_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1709..4933
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Clostridium RepID=B6FU07_9CLOT
L1_008_000G1_scaffold_519_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5118..9233
DNA (4116bp) protein (1372aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU06_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEA80500.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
metallophosphoesterase
L1_008_000G1_scaffold_519_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9390..10784
DNA (1395bp) protein (465aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=2 Tax=Clostridium RepID=B6FU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23420.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_519_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10777..11358
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23419.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
guanylate kinase
L1_008_000G1_scaffold_519_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11444..12433
DNA (990bp) protein (330aa)
Putative DNA polymerase III, subunit gamma and tau n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU03_9CLOT
Putative DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEA80497.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12437..13348
DNA (912bp) protein (304aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=B6FU02_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEA80496.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized homolog of PSP1
L1_008_000G1_scaffold_519_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13338..14078
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=2 Tax=Clostridium RepID=B6FU01_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEA80495.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14094..14933
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIP2_9CLOT
conserved hypothetical protein TIGR00096
L1_008_000G1_scaffold_519_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15056..16168
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23414.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000G1_scaffold_519_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16232..17560
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEA80492.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17771..20374
DNA (2604bp) protein (868aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23412.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_519_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20387..21535
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23411.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted permease
L1_008_000G1_scaffold_519_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21693..22610
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80489.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22607..23932
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80488.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23929..25440
DNA (1512bp) protein (504aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ3_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEA80487.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase
L1_008_000G1_scaffold_519_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25474..26136
DNA (663bp) protein (221aa)
Transporter gate domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ2_9CLOT
Transporter gate domain protein {ECO:0000313|EMBL:EEA80486.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
nucleoside recognition domain containing protein
L1_008_000G1_scaffold_519_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26369..27949
DNA (1581bp) protein (527aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ1_9CLOT
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EEA80485.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_519_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28008..28643)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23405.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_519_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28778..29884
DNA (1107bp) protein (369aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23404.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_519_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29890..31215
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23403.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_519_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31352..31873
DNA (522bp) protein (174aa)
Transporter gate domain protein n=2 Tax=Clostridium RepID=B6FTY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23402.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
spore maturation protein B
L1_008_000G1_scaffold_519_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31995..32156
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23401.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_519_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32446..33018
DNA (573bp) protein (191aa)
ATP synthase subunit a n=2 Tax=Clostridium RepID=B6FTY4_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
F0F1 ATP synthase subunit A
L1_008_000G1_scaffold_519_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33050..33277
DNA (228bp) protein (76aa)
ATP synthase F0, C subunit n=2 Tax=Clostridium RepID=B6FTY3_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_519_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33349..33852
DNA (504bp) protein (168aa)
ATP synthase subunit b n=2 Tax=Clostridium RepID=B6FTY2_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATP synthase F0 subunit B
L1_008_000G1_scaffold_519_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33833..34330
DNA (498bp) protein (166aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=2 Tax=Clostridium RepID=B6FTY1_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_519_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34335..35840
DNA (1506bp) protein (502aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit alpha n=2 Tax=Clostridium RepID=B6FTY0_9CLOT
ATP synthase F1 subunit alpha
L1_008_000G1_scaffold_519_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35842..36735
DNA (894bp) protein (298aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Clostridium RepID=B6FTX9_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_519_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36757..38148
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit beta n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX8_9CLOT
F-type H+-transporting ATPase subunit beta
Displaying items 1-30 of 37 in total

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