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L1_008_000G1_scaffold_534

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_534_1
unknown

Not on your lists

comp(49..246)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

L1_008_000G1_scaffold_534_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(323..1261)
-----------------
DNA (939bp)
protein (313aa)
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas RepID=I2BU78_PSEFL
AraC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ57811.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1428..2105
-----------------
DNA (678bp)
protein (226aa)
Putative regulatory protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HDN3_9PSED
ThiJ/PfpI family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58572.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..3314
-----------------
DNA (1131bp)
protein (377aa)
N-ethylmaleimide reductase (EC:1.-.-.-)
Putative oxidoreductase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HA77_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4498)
-----------------
DNA (999bp)
protein (333aa)
Putative dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KC07_9PSED
NAD(P)H quinone oxidoreductase, PIG3 family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4682..5068
-----------------
DNA (387bp)
protein (129aa)
DoxX family protein n=3 Tax=Pseudomonas RepID=I2BPM9_PSEFL
DoxX family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..5939)
-----------------
DNA (819bp)
protein (273aa)
arylesterase (EC:3.1.1.2)
Uncharacterized protein {ECO:0000313|EMBL:AFJ55579.1}; EC=3.1.1.2 {ECO:0000313|EMBL:AFJ55579.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Arylesterase n=2 Tax=Pseudomonas RepID=I2BMU6_PSEFL
L1_008_000G1_scaffold_534_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6033..7424)
-----------------
DNA (1392bp)
protein (464aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BL66_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54999.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7421..8317)
-----------------
DNA (897bp)
protein (299aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HA73_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8556..9128)
-----------------
DNA (573bp)
protein (191aa)
PAS domain-containing protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HHF0_9PSED
sensory box transcriptional regulator, LuxR family
Uncharacterized protein {ECO:0000313|EMBL:AFJ58006.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10437
-----------------
DNA (1179bp)
protein (393aa)
Thiolase domain protein n=3 Tax=Pseudomonas RepID=I2BN99_PSEFL
thiolase domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55732.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10441..11970
-----------------
DNA (1530bp)
protein (510aa)
AMP-binding enzyme n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQI0_PSEFL
AMP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56513.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12004..13323
-----------------
DNA (1320bp)
protein (440aa)
Transporter, major facilitator family n=3 Tax=Pseudomonas RepID=I2BKX9_PSEFL
major facilitator family transporter
Uncharacterized protein {ECO:0000313|EMBL:AFJ54912.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13467..14015
-----------------
DNA (549bp)
protein (183aa)
Putative phosphoglycerate mutase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HA71_9PSED
phosphoglycerate mutase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14151..15638
-----------------
DNA (1488bp)
protein (496aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HHE6_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..16585
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IP51_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16644..17399
-----------------
DNA (756bp)
protein (252aa)
cobF; precorrin-6A synthase (EC:2.1.1.152)
Precorrin 6A synthase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6J0B0_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17410..18126
-----------------
DNA (717bp)
protein (239aa)
phospholipase/carboxylesterase family protein (EC:3.1.-.-)
Putative esterase n=1 Tax=Pseudomonas sp. CF150 RepID=S6K1C4_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18260..18814)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BUG9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57902.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18887..20698)
-----------------
DNA (1812bp)
protein (604aa)
Putative potassium-efflux system membrane protein n=2 Tax=Pseudomonas RepID=S6HHE3_9PSED
glutathione-regulated potassium-efflux system protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21110..32497
-----------------
DNA (11388bp)
protein (3796aa)
Outer membrane transport barrel n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BPL7_PSEFL
outer membrane transport barrel
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32614..33285)
-----------------
DNA (672bp)
protein (224aa)
Putative LuxR family regulatory protein n=2 Tax=Pseudomonas RepID=S6J0A2_9PSED
LuxR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33515..34759)
-----------------
DNA (1245bp)
protein (415aa)
megL; methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BN85_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34883..35353
-----------------
DNA (471bp)
protein (157aa)
Transcriptional regulator, AsnC family n=3 Tax=Pseudomonas RepID=I2BWN0_PSEFL
AsnC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ58663.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35510..36940)
-----------------
DNA (1431bp)
protein (477aa)
aminotransferase, classes I and II/transcriptional regulator, GntR family (EC:2.6.1.-)
Putative GntR family transcriptional regulator n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HHD8_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_534_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37099..37281
-----------------
DNA (183bp)
protein (61aa)
Rubredoxin n=3 Tax=Pseudomonas RepID=I2BUZ7_PSEFL
alkG; rubredoxin 2
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37309..38178
-----------------
DNA (870bp)
protein (290aa)
AP endonuclease, family 2 n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BMN8_PSEFL
AP endonuclease, family 2
Uncharacterized protein {ECO:0000313|EMBL:AFJ55521.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38248..38880
-----------------
DNA (633bp)
protein (211aa)
Translocator protein, LysE family n=2 Tax=Pseudomonas RepID=I2BYD3_PSEFL
translocator protein, LysE family
Uncharacterized protein {ECO:0000313|EMBL:AFJ59266.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38960..40018
-----------------
DNA (1059bp)
protein (353aa)
MASE2 domain/diguanylate cyclase domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BR30_PSEFL
MASE2 domain/diguanylate cyclase domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56713.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_534_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40067..41296
-----------------
DNA (1230bp)
protein (410aa)
peptidase, M20/M25/M40 family (EC:3.4.-.-)
Uncharacterized protein {ECO:0000313|EMBL:AFJ57619.1}; EC=3.4.-.- {ECO:0000313|EMBL:AFJ57619.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Peptidase, M20/M25/M40 family n=2 Tax=Pseudomonas RepID=I2BTN6_PSEFL
Displaying items 1-30 of 34 in total

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