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L1_008_000G1_scaffold_538

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_538_1
unknown

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3..110
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000G1_scaffold_538_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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196..969
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N7L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17798.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_538_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1202..1930
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17797.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Camelysin metallo-endopeptidase.
L1_008_000G1_scaffold_538_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1951..2727
DNA (777bp) protein (259aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N7K8_9FIRM
Alternate signal-mediated exported protein {ECO:0000313|EMBL:CCZ34682.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_000G1_scaffold_538_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2750..3463
DNA (714bp) protein (238aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N7K7_9FIRM
Alternate signal-mediated exported protein {ECO:0000313|EMBL:EHQ46459.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Camelysin metallo-endopeptidase.
L1_008_000G1_scaffold_538_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3615..4637
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N7K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17794.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_538_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4738..6213
DNA (1476bp) protein (492aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RIH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34648.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
sugar kinase
L1_008_000G1_scaffold_538_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6466..12033)
DNA (5568bp) protein (1856aa)
Diguanylate cyclase (GGDEF) domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N7K4_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHM93316.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L1_008_000G1_scaffold_538_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12371..13117)
DNA (747bp) protein (249aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N7K3_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_000G1_scaffold_538_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13192..13584
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RIH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34645.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_000G1_scaffold_538_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13606..15249)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RIH5_9FIRM
Fibronectin-binding protein/fibrinogen-binding protein {ECO:0000313|EMBL:CCZ34636.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
yloA; putative protein YloA
L1_008_000G1_scaffold_538_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15385..15945
DNA (561bp) protein (187aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Guanylate kinase n=5 Tax=Erysipelotrichaceae RepID=B0N7K0_9FIRM
guk; putative guanylate kinase
L1_008_000G1_scaffold_538_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15974..16384
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N7J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93321.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_000G1_scaffold_538_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16510..16962
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N7J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46449.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_008_000G1_scaffold_538_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16975..17547
DNA (573bp) protein (191aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N7J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34633.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DUF218 domain-containing protein
L1_008_000G1_scaffold_538_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17548..18369)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QYB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34632.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
membrane associated lipoprotein
L1_008_000G1_scaffold_538_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18486..19004
DNA (519bp) protein (173aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RII1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46446.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Nitroreductase
L1_008_000G1_scaffold_538_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19045..19170
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17782.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_538_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19365..21563
DNA (2199bp) protein (733aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Primosomal protein N n=1 Tax=Coprobacillus sp. D7 RepID=C3RII3_9FIRM
putative DNA replication factor Y
L1_008_000G1_scaffold_538_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21576..22829
DNA (1254bp) protein (418aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
16S rRNA (EC:2.1.1.176)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QYB8_9FIRM
L1_008_000G1_scaffold_538_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22831..23859
DNA (1029bp) protein (343aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Probable dual-specificity RNA methyltransferase RlmN n=5 Tax=Erysipelotrichaceae RepID=B0N7J1_9FIRM
rlmN; ribosomal RNA large subunit methyltransferase RlmN
L1_008_000G1_scaffold_538_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23859..24596
DNA (738bp) protein (246aa)
Serine/threonine phosphatase stp {ECO:0000313|EMBL:EDS17778.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EDS17778.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Serine/threonine phosphatase stp n=4 Tax=Erysipelotrichaceae RepID=B0N7J0_9FIRM
Ser/Thr phosphatase
L1_008_000G1_scaffold_538_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24598..26544
DNA (1947bp) protein (649aa)
Kinase domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7I9_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EDS17777.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
serine/threonine protein kinase
L1_008_000G1_scaffold_538_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26554..27429
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Putative ribosome biogenesis GTPase RsgA n=5 Tax=Erysipelotrichaceae RepID=B0N7I8_9FIRM
GTPase RsgA
L1_008_000G1_scaffold_538_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27422..28063
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=5 Tax=Erysipelotrichaceae RepID=B0N7I7_9FIRM
L1_008_000G1_scaffold_538_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28060..28650
DNA (591bp) protein (197aa)
Thiamine pyrophosphokinase n=4 Tax=Coprobacillus RepID=C3RIJ0_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCZ34605.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
thiamine pyrophosphokinase
L1_008_000G1_scaffold_538_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28823..33979
DNA (5157bp) protein (1719aa)
Hyalurononglucosaminidase {ECO:0000313|EMBL:EDS17773.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDS17773.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Hyalurononglucosaminidase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7I5_9FIRM
nagH; hyaluronidase
L1_008_000G1_scaffold_538_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34110..34592)
DNA (483bp) protein (161aa)
PTS system, glucose subfamily, IIA component n=5 Tax=Erysipelotrichaceae RepID=B0N7I4_9FIRM
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CCZ34603.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ptbA; PTS system glucose subfamily transporter subunit IIA
L1_008_000G1_scaffold_538_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34985..36514
DNA (1530bp) protein (510aa)
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EDS17771.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS17771.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
nagE; PTS system, N-acetylglucosamine-specific IIBC component (EC:2.7.1.69)
PTS system, N-acetylglucosamine-specific IIBC component n=3 Tax=Erysipelotrichaceae RepID=B0N7I3_9FIRM
L1_008_000G1_scaffold_538_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

36519..37364
DNA (846bp) protein (282aa)
Transcription antiterminator LicT n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7I2_9FIRM
Transcription antiterminator LicT {ECO:0000313|EMBL:EDS17770.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcription antiterminator
Displaying items 1-30 of 32 in total

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