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L1_008_000G1_scaffold_548

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_548_1
unknown

Not on your lists

comp(1..351)
DNA (351bp) protein (117aa)

This feature has no annotations

L1_008_000G1_scaffold_548_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(582..1967)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24510.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative transglutaminase/protease
L1_008_000G1_scaffold_548_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2262..3617)
DNA (1356bp) protein (452aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSV7_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA24511.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_548_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3667..4263)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24512.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4367..5062)
DNA (696bp) protein (232aa)
BlaR1 peptidase M56 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAL7_9FIRM
BlaR1 peptidase M56 {ECO:0000313|EMBL:CDA24513.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptidase M56 BlaR1
L1_008_000G1_scaffold_548_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5053..5946)
DNA (894bp) protein (298aa)
BlaR1 peptidase M56 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAL7_9FIRM
BlaR1 peptidase M56 {ECO:0000313|EMBL:CDA24513.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L1_008_000G1_scaffold_548_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5949..6308)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24514.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
CopY family transcriptional repressor
L1_008_000G1_scaffold_548_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6474..6671)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24515.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_548_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6783..7343
DNA (561bp) protein (187aa)
UPF0340 protein BN528_01370 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSW2_9FIRM
UPF0340 protein BN528_01370 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7362..8093
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24517.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
3-oxoacyl-[acyl-carrier-protein] reductase
L1_008_000G1_scaffold_548_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8073..10283)
DNA (2211bp) protein (737aa)
Glycogen debranching enzyme GlgX n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAM0_9FIRM
Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:CDA24518.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
glycogen debranching enzyme GlgX
L1_008_000G1_scaffold_548_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10287..11459)
DNA (1173bp) protein (391aa)
Poly-gamma-glutamate biosynthesis (Capsule formation) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIG6_9FIRM
Poly-gamma-glutamate biosynthesis (Capsule formation) {ECO:0000313|EMBL:CDA24519.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L1_008_000G1_scaffold_548_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11489..12277)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24520.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12456..12944)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24521.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_548_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12949..14235)
DNA (1287bp) protein (429aa)
Transglutaminase domain-containing protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6V8_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CDA24522.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transglutaminase domain-containing protein
L1_008_000G1_scaffold_548_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14357..14728)
DNA (372bp) protein (124aa)
Probable transcriptional regulator n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAM3_9FIRM
Probable transcriptional regulator {ECO:0000313|EMBL:CDA24523.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transcriptional regulator, ArsR family
L1_008_000G1_scaffold_548_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14746..16674)
DNA (1929bp) protein (643aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24524.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_548_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16687..16905)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24525.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17187..18986
DNA (1800bp) protein (600aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSW8_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA24526.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Methyl-accepting chemotaxis protein
L1_008_000G1_scaffold_548_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19065..20192)
DNA (1128bp) protein (376aa)
Predicted multitransmembrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6W2_9FIRM
Predicted multitransmembrane protein {ECO:0000313|EMBL:CDA24527.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted multitransmembrane protein
L1_008_000G1_scaffold_548_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20205..21977)
DNA (1773bp) protein (591aa)
Calcineurin-like phosphoesterase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAM8_9FIRM
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CDA24528.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22164..22622)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24529.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Rubrerythrin.
L1_008_000G1_scaffold_548_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22688..23566)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24530.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23662..24717)
DNA (1056bp) protein (352aa)
Putative dehydrogenase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSX3_9FIRM
Putative dehydrogenase {ECO:0000313|EMBL:CDA24531.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Glycerol dehydrogenase and related enzymes
L1_008_000G1_scaffold_548_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24894..25526
DNA (633bp) protein (211aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6W7_9FIRM
L1_008_000G1_scaffold_548_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25527..26534)
DNA (1008bp) protein (336aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase RluA family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAN0_9FIRM
L1_008_000G1_scaffold_548_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26767..27120
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YII5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24534.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_548_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27107..28102
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79320.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_000G1_scaffold_548_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28138..28983
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24537.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Protein of unknown function (DUF2807).
L1_008_000G1_scaffold_548_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29123..29653)
DNA (531bp) protein (177aa)
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAN4_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDA24538.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted membrane protein
Displaying items 1-30 of 42 in total

View Taxonomy