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L1_008_000G1_scaffold_549

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_549_1
Lactobacillus curvatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1..297)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lactobacillus curvatus CRL 705 RepID=G6CGK7_LACCU
Uncharacterized protein {ECO:0000313|EMBL:EHE85344.1}; TaxID=1074451 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus curvatus CRL 705.;"
hypothetical protein
L1_008_000G1_scaffold_549_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(339..1199)
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N297_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45352.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_008_000G1_scaffold_549_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1177..1932)
DNA (756bp) protein (252aa)
Copper homeostasis protein CutC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K388_CLOBU
Copper homeostasis protein CutC {ECO:0000313|EMBL:ETI88475.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Uncharacterized protein involved in copper resistance
L1_008_000G1_scaffold_549_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1938..3044)
DNA (1107bp) protein (369aa)
Putative dipeptidase n=2 Tax=Coprobacillus RepID=H1AP48_9FIRM
Putative dipeptidase {ECO:0000313|EMBL:CCZ33768.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dipeptidase, putative
L1_008_000G1_scaffold_549_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3046..4002)
DNA (957bp) protein (319aa)
glycosylasparaginase precursor. Threonine peptidase. MEROPS family T02 (EC:3.5.1.26 3.5.1.1)
Asparaginase n=5 Tax=Erysipelotrichaceae RepID=B0N294_9FIRM
Asparaginase {ECO:0000313|EMBL:EDS19854.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_000G1_scaffold_549_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4049..4573)
DNA (525bp) protein (175aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (EC:1.21.4.2)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N293_9FIRM
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B {ECO:0000313|EMBL:EHM90792.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_000G1_scaffold_549_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4585..5937)
DNA (1353bp) protein (451aa)
Putative PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N292_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system, lactose/cellobiose family IIC component
L1_008_000G1_scaffold_549_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5957..6283)
DNA (327bp) protein (109aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N291_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHQ45346.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_000G1_scaffold_549_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6376..6690)
DNA (315bp) protein (105aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
PTS system Lactose/Cellobiose specific IIA subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9H0_9FIRM
PTS system Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:CCZ25208.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000G1_scaffold_549_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6779..7354)
DNA (576bp) protein (192aa)
RDD family protein n=2 Tax=Erysipelotrichaceae RepID=B0N289_9FIRM
RDD family protein {ECO:0000313|EMBL:EDS19849.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
RDD family.
L1_008_000G1_scaffold_549_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7369..9273)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ67_9FIRM
PRD domain protein {ECO:0000313|EMBL:EDS19848.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
BigG family transcription antiterminator
L1_008_000G1_scaffold_549_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9730..10446)
DNA (717bp) protein (239aa)
DeoR-like helix-turn-helix domain protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T2RCH6_CLOSO
DeoR family transcriptional regulator {ECO:0000313|EMBL:CEP90052.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DeoR-family transcriptional regulator
L1_008_000G1_scaffold_549_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10751..11536
DNA (786bp) protein (262aa)
UPI0003D66B33 related cluster n=1 Tax=unknown RepID=UPI0003D66B33
Haloacid dehalogenase {ECO:0000313|EMBL:KHD17222.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HAD hydrolase, IIB family protein
L1_008_000G1_scaffold_549_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11668..12177)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145, ECO:0000313|EMBL:AIY82593.1}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ferritin family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRQ8_CLOP1
ferritin
L1_008_000G1_scaffold_549_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12614..13567
DNA (954bp) protein (318aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXC8_CLOSA
DNA methylase N-4/N-6 domain protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:AGX45419.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_549_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14056..14535)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
S-ribosylhomocysteinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E9E819
S-ribosylhomocysteinase
L1_008_000G1_scaffold_549_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14724..16073)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D583_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG53538.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_549_18
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(16237..18222)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PVY7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79841.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L1_008_000G1_scaffold_549_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18450..19040
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TKL2_CLOBB
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACD23338.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L1_008_000G1_scaffold_549_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19120..20409)
DNA (1290bp) protein (430aa)
dnaC1; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGF59457.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGF59457.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7V8_9CLOT
L1_008_000G1_scaffold_549_21

Not on your lists

comp(20422..21255)
DNA (834bp) protein (278aa)
Putative phage replisome organizer n=3 Tax=Clostridium botulinum RepID=C3KWT5_CLOB6
Replisome organizer {ECO:0000313|EMBL:AJA42836.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
putative phage replisome organizer
L1_008_000G1_scaffold_549_22
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(21306..21500)
DNA (195bp) protein (65aa)
Helix-turn-helix domain protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT82_TEPAE
Helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCP27412.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L1_008_000G1_scaffold_549_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21944..22516)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99737.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L1_008_000G1_scaffold_549_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22739..23221)
DNA (483bp) protein (161aa)
PTS system, glucose family, EIIA component n=2 Tax=Clostridium botulinum RepID=C3KZ92_CLOB6
PTS system glucose family Etransporter subunit IIA
PTS system, glucose family, EIIA component {ECO:0000313|EMBL:ACO86376.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L1_008_000G1_scaffold_549_25
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23351..24277)
DNA (927bp) protein (309aa)
Transporter n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I4W3_9CLOT
Transporter {ECO:0000313|EMBL:ETA80224.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
putative auxin efflux carrier
L1_008_000G1_scaffold_549_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24357..25130
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=3 Tax=Clostridium botulinum RepID=C3KZ91_CLOB6
RpiR family transcriptional regulator
SIS domain protein {ECO:0000313|EMBL:AJE12471.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L1_008_000G1_scaffold_549_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25155..25928
DNA (774bp) protein (258aa)
Sialic acid utilization regulator, RpiR family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BV72_9CLOT
Sialic acid utilization regulator, RpiR family protein {ECO:0000313|EMBL:EOR21049.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
RpiR family transcriptional regulator
L1_008_000G1_scaffold_549_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25966..27492)
DNA (1527bp) protein (509aa)
PTS system maltose and glucose-specific transporter subunit IIC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVH1_9CLOT
PTS system maltose and glucose-specific transporter subunit IIC {ECO:0000313|EMBL:EOR21048.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
PTS system maltose/glucose-specfic transporter subunit IIBC
L1_008_000G1_scaffold_549_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27795..29120)
DNA (1326bp) protein (442aa)
glvA-1; maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Maltose-6'-phosphate glucosidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVI9_9CLOT
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:EOR21047.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L1_008_000G1_scaffold_549_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29595..30677)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QY78_CLOBU
MFS transporter
Displaying items 1-30 of 42 in total

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