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L1_008_000G1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_554_1
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)
Putative transposase protein TnpA-rve n=1 Tax=Escherichia coli UMNK88 RepID=G0XAZ5_ECOLX
transposase
TnpA IS26 (1) {ECO:0000313|EMBL:ELT46241.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
L1_008_000G1_scaffold_554_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1135..1992)
DNA (858bp) protein (286aa)
Replication protein RepA n=86 Tax=Escherichia coli RepID=D2NNF5_ECOS5
replication protein RepA
Replication initiation protein {ECO:0000313|EMBL:EQY86880.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L1_008_000G1_scaffold_554_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2292..2552)
DNA (261bp) protein (87aa)
RepFIIA replication protein RepB n=153 Tax=Escherichia coli RepID=C8CGG6_ECOLX
repB; replication protein
RepFIIA replication protein RepB {ECO:0000313|EMBL:ACU68736.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_000G1_scaffold_554_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2792..3382)
DNA (591bp) protein (197aa)
Uncharacterized protein n=116 Tax=Escherichia coli RepID=C8CGG5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57936.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L1_008_000G1_scaffold_554_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3420..3629)
DNA (210bp) protein (70aa)
HhA n=166 Tax=Bacteria RepID=D9Z5A8_ECOLX
hemolysin expression-modulating protein hmo
Putative transcriptional regulator {ECO:0000313|EMBL:EFJ70732.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L1_008_000G1_scaffold_554_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4136)
DNA (462bp) protein (154aa)
Nuclease-like protein n=185 Tax=Bacteria RepID=B8XWT7_ECOLX
putative endonuclease
Endonuclease {ECO:0000313|EMBL:EZD18359.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L1_008_000G1_scaffold_554_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4722..5282)
DNA (561bp) protein (187aa)
Fertility inhibition protein n=172 Tax=Bacteria RepID=FINO2_ECOLX
conjugal transfer protein FinO
Fertility inhibition protein {ECO:0000313|EMBL:EFK71816.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L1_008_000G1_scaffold_554_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5385..6245)
DNA (861bp) protein (287aa)
Uncharacterized 31.7 kDa protein in traX-finO intergenic region n=162 Tax=Enterobacteriaceae RepID=YPT2_ECOLX
hypothetical protein
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:AKA93645.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli VR50.;"
L1_008_000G1_scaffold_554_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..7050)
DNA (747bp) protein (249aa)
F pilin acetylation protein n=1 Tax=Escherichia coli (strain UTI89 / UPEC) RepID=Q1R1P8_ECOUT
traX; conjugal transfer pilus acetylation protein TraX
Conjugal transfer protein {ECO:0000313|EMBL:EYY72548.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
L1_008_000G1_scaffold_554_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7070..12340)
DNA (5271bp) protein (1757aa)
IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI n=42 Tax=Escherichia coli RepID=C8CGS7_ECOLX
TraI protein {ECO:0000313|EMBL:BAI57929.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
traI; conjugal transfer nickase/helicase TraI
L1_008_000G1_scaffold_554_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..14484)
DNA (2145bp) protein (715aa)
IncF plasmid conjugative transfer protein TraD n=34 Tax=Escherichia coli RepID=C8CGS6_ECOLX
DNA binding protein TraD {ECO:0000313|EMBL:ABE10713.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
traD; conjugal transfer protein TraD
L1_008_000G1_scaffold_554_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15272)
DNA (738bp) protein (246aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=Q1R1Q2_ECOUT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP97210.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L1_008_000G1_scaffold_554_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15475..16206)
DNA (732bp) protein (244aa)
TraT complement resistance protein n=156 Tax=Enterobacteriaceae RepID=TRAT2_ECOLX
traT; conjugal transfer protein TraT
TraT complement resistance protein {ECO:0000313|EMBL:EOV68276.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L1_008_000G1_scaffold_554_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16255..16734)
DNA (480bp) protein (160aa)
Surface exclusion inner membrane protein n=102 Tax=Escherichia coli RepID=B7LJ30_ECOLU
TraS protein
Uncharacterized protein {ECO:0000313|EMBL:ESA95379.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L1_008_000G1_scaffold_554_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16756..19578)
DNA (2823bp) protein (941aa)
IncF plasmid conjugative transfer protein TraG n=97 Tax=Escherichia coli RepID=C8CGS2_ECOLX
Conjugal transfer mating pair stabilization protein TraG {ECO:0000313|EMBL:EQP40982.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
traG; conjugal transfer protein TraG
L1_008_000G1_scaffold_554_16
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19575..20948)
DNA (1374bp) protein (458aa)
Conjugal transfer pilus assembly protein TraH n=187 Tax=Enterobacteriaceae RepID=Q6SJ00_ECOLX
traH; conjugal transfer pilus assembly protein TraH
TraH protein {ECO:0000313|EMBL:AJQ17453.1}; TaxID=1617964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 4c.;"
L1_008_000G1_scaffold_554_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20935..21327)
DNA (393bp) protein (131aa)
Uncharacterized protein n=109 Tax=Escherichia RepID=Q1R1Q7_ECOUT
trbF; conjugal transfer protein TrbF
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EQY86864.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L1_008_000G1_scaffold_554_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21308..21595)
DNA (288bp) protein (96aa)
IncF plasmid conjugative transfer protein TrbJ n=99 Tax=Enterobacteriaceae RepID=C8CGR9_ECOLX
TrbJ protein
Putative conjugal transfer protein TrbJ {ECO:0000313|EMBL:EFJ71392.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L1_008_000G1_scaffold_554_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21585..22130)
DNA (546bp) protein (182aa)
IncF plasmid conjugative transfer protein TrbB n=140 Tax=Enterobacteriaceae RepID=C8CGR8_ECOLX
conjugal transfer protein TrbB
Type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB {ECO:0000313|EMBL:EUL92749.1}; TaxID=1400138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes UCI 15.;"
L1_008_000G1_scaffold_554_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22117..22401)
DNA (285bp) protein (95aa)
IncF plasmid conjugative transfer protein TraQ n=166 Tax=Enterobacteriaceae RepID=C8CGR7_ECOLX
TraQ; conjugal transfer protein TraQ
Type-F conjugative transfer system pilin chaperone TraQ {ECO:0000313|EMBL:EFI89703.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
L1_008_000G1_scaffold_554_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22482..22817
DNA (336bp) protein (112aa)
ArtA n=155 Tax=Enterobacteriaceae RepID=G3G3T0_ECOLX
ArtA
Putative membrane protein {ECO:0000313|EMBL:KDX82805.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L1_008_000G1_scaffold_554_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22798..23139)
DNA (342bp) protein (114aa)
IncF plasmid conjugative transfer pilus assembly protein TrbA n=110 Tax=Escherichia coli RepID=C8CGR6_ECOLX
conjugal transfer protein TrbA
Putative membrane protein {ECO:0000313|EMBL:KEJ36029.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L1_008_000G1_scaffold_554_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23153..23896)
DNA (744bp) protein (248aa)
IncF plasmid conjugative transfer pilus assembly protein TraF n=119 Tax=Escherichia coli RepID=C8CGR5_ECOLX
traF; conjugal transfer protein TraF
Conjugal transfer protein TraF {ECO:0000313|EMBL:KJW54133.1}; IncF plasmid conjugative transfer pilus assembly protein TraF {ECO:0000313|EMBL:ACU68835.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_000G1_scaffold_554_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23889..24146)
DNA (258bp) protein (86aa)
IncF plasmid conjugative transfer protein TrbE n=105 Tax=Escherichia RepID=C8CGR4_ECOLX
trbE; conjugal transfer protein TrbE
Conjugal transfer protein TrbE {ECO:0000313|EMBL:ESA95369.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L1_008_000G1_scaffold_554_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24173..26023)
DNA (1851bp) protein (617aa)
IncF plasmid conjugative transfer protein TraN n=107 Tax=Escherichia coli RepID=C8CGR3_ECOLX
Type-F conjugative transfer system mating-pair stabilization protein TraN {ECO:0000313|EMBL:ESA95368.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
TraN protein
L1_008_000G1_scaffold_554_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26020..26658)
DNA (639bp) protein (213aa)
IncF plasmid conjugative transfer protein TrbC n=119 Tax=Escherichia RepID=C8CGR2_ECOLX
TrbC protein
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:EFJ71384.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L1_008_000G1_scaffold_554_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26667..26972)
DNA (306bp) protein (102aa)
Uncharacterized protein n=122 Tax=Enterobacteriaceae RepID=G3K1J1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU86149.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L1_008_000G1_scaffold_554_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27002..27994)
DNA (993bp) protein (331aa)
TraU n=220 Tax=Bacteria RepID=D9Z589_ECOLX
traU; conjugal transfer protein TraU
TraU family protein {ECO:0000313|EMBL:KEN82198.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L1_008_000G1_scaffold_554_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27991..28623)
DNA (633bp) protein (211aa)
F pilus assembly protein n=100 Tax=Escherichia coli RepID=B7LJ43_ECOLU
traW; conjugal transfer protein TraW
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:KEN82197.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L1_008_000G1_scaffold_554_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28620..29006)
DNA (387bp) protein (129aa)
TrbI n=193 Tax=Bacteria RepID=D9Z587_ECOLX
trbI; conjugal transfer protein TrbI
Type-F conjugative transfer system protein TrbI {ECO:0000313|EMBL:KDW71800.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
Displaying items 1-30 of 48 in total

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