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L1_008_000G1_scaffold_556

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_556_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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311..2074
DNA (1764bp) protein (588aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4Z4_9LACO
ABC-type multidrug transport system, ATPase and permease component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB62153.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L1_008_000G1_scaffold_556_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2215..4788
DNA (2574bp) protein (858aa)
DNA mismatch repair protein MutS n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUW5_9LACO
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
DNA mismatch repair protein MutS
L1_008_000G1_scaffold_556_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4794..6686
DNA (1893bp) protein (631aa)
DNA mismatch repair protein MutL n=1 Tax=Lactobacillus gasseri K7 RepID=S1SJG2_9LACO
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
DNA mismatch repair protein MutL
L1_008_000G1_scaffold_556_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6692..7270
DNA (579bp) protein (193aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Lactobacillus gasseri RepID=D7V4Z1_9LACO
ATP-dependent DNA helicase RuvA
L1_008_000G1_scaffold_556_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7298..8326
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4Z0_9LACO
Holliday junction DNA helicase RuvB
L1_008_000G1_scaffold_556_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8379..8831
DNA (453bp) protein (151aa)
Preprotein translocase, YajC subunit n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4Y9_9LACO
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AJC08400.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8939..10387
DNA (1449bp) protein (483aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUW0_9LACO
glucose-6-phosphate 1-dehydrogenase
L1_008_000G1_scaffold_556_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10387..11508
DNA (1122bp) protein (374aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
DNA polymerase IV n=1 Tax=Lactobacillus gasseri K7 RepID=S1SJF9_9LACO
DNA polymerase IV
L1_008_000G1_scaffold_556_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11549..12514
DNA (966bp) protein (322aa)
DHH family protein n=2 Tax=Lactobacillus gasseri RepID=D7V4Y6_9LACO
phosphoesterase, DHH family protein
DHH family protein {ECO:0000313|EMBL:EFB62296.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L1_008_000G1_scaffold_556_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12498..13883
DNA (1386bp) protein (462aa)
DEAD/DEAH box helicase n=2 Tax=Lactobacillus gasseri RepID=D7V4Y5_9LACO
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AJC08396.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


14114..16762
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
alaS; alanyl-tRNA synthase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4Y4_9LACO
L1_008_000G1_scaffold_556_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16817..17074
DNA (258bp) protein (86aa)
UPF0297 protein LGAS_0422 n=13 Tax=Lactobacillus RepID=Y422_LACGA
hypothetical protein
UPF0297 protein LGAS_0422 {ECO:0000255|HAMAP-Rule:MF_01507}; TaxID=324831 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri (strain ATCC 33323 / DSM 20243 / JCM 1131 /; NCIMB 11718 / AM63).;"
L1_008_000G1_scaffold_556_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17074..17505
DNA (432bp) protein (144aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Putative Holliday junction resolvase n=2 Tax=Lactobacillus gasseri RepID=D7V4Y2_9LACO
Holliday junction resolvase
L1_008_000G1_scaffold_556_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17507..17821
DNA (315bp) protein (105aa)
UPF0473 protein LK7_08655 n=1 Tax=Lactobacillus gasseri K7 RepID=S1S516_9LACO
hypothetical protein
UPF0473 protein P906_07580 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17877..18419
DNA (543bp) protein (181aa)
CvpA family protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4Y0_9LACO
CvpA family protein
CvpA family protein {ECO:0000313|EMBL:AJC08391.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18463..20829
DNA (2367bp) protein (789aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Endonuclease MutS2 n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNM8_9LACO
DNA mismatch repair protein MutS
L1_008_000G1_scaffold_556_17
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20909..21220
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUV4_9LACO
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_18
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21306..21701)
DNA (396bp) protein (132aa)
Predicted hydrocarbon binding protein, V4R domain n=8 Tax=Lactobacillus gasseri RepID=Q045N9_LACGA
hydrocarbon binding protein
Uncharacterized protein {ECO:0000313|EMBL:KFL96616.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L1_008_000G1_scaffold_556_19
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21798..22598
DNA (801bp) protein (267aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Glutamate racemase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S511_9LACO
glutamate racemase
L1_008_000G1_scaffold_556_20
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


22600..23223
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Non-canonical purine NTP pyrophosphatase n=2 Tax=Lactobacillus gasseri RepID=D7V4X5_9LACO
nucleoside-triphosphate diphosphatase
L1_008_000G1_scaffold_556_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23359..24537
DNA (1179bp) protein (393aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Acetate kinase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNM4_9LACO
acetate kinase
L1_008_000G1_scaffold_556_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24580..25476)
DNA (897bp) protein (299aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Lactobacillus gasseri RepID=D7V4X3_9LACO
small mechanosensitive ion channel protein MscS
Small mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:AJC08384.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25603..26034
DNA (432bp) protein (144aa)
Methyl-accepting chemotaxis-like protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SJE6_9LACO
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:AJC08383.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_24
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26057..26398
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Lactobacillus gasseri RepID=C4VTD6_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFL96610.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L1_008_000G1_scaffold_556_25
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26491..27597)
DNA (1107bp) protein (369aa)
Xaa-Pro dipeptidase n=2 Tax=Lactobacillus gasseri RepID=D7V4X0_9LACO
dipeptidase
Dipeptidase {ECO:0000313|EMBL:AJC08381.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_26
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27741..28742
DNA (1002bp) protein (334aa)
Catabolite control protein A n=2 Tax=Lactobacillus gasseri RepID=S1SNM0_9LACO
catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:AJC08380.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_27
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28819..30453)
DNA (1635bp) protein (545aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4W8_9LACO
ABC transporter permease {ECO:0000313|EMBL:AJC08379.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
ABC transporter permease
L1_008_000G1_scaffold_556_28
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30620..33448)
DNA (2829bp) protein (943aa)
Membrane carboxypeptidase (Penicillin-binding protein) n=1 Tax=Lactobacillus gasseri K7 RepID=S1SIW5_9LACO
Membrane protein {ECO:0000313|EMBL:AJC08378.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
membrane protein
L1_008_000G1_scaffold_556_29
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33546..34943)
DNA (1398bp) protein (466aa)
Dipeptidase PepV n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUB4_9LACO
dipeptidase PepV
Dipeptidase PepV {ECO:0000313|EMBL:AJC08377.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_556_30
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34961..36343)
DNA (1383bp) protein (461aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SN47_9LACO
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AJC08376.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Displaying items 1-30 of 38 in total

View Taxonomy