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L1_008_000G1_scaffold_559

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_559_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(172..1197)
DNA (1026bp) protein (342aa)
L-iditol 2-dehydrogenase n=2 Tax=Clostridium symbiosum RepID=E9SKU4_CLOSY
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:ERI79144.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sorbitol dehydrogenase
L1_008_000G1_scaffold_559_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1441..3216
DNA (1776bp) protein (592aa)
Transcriptional regulator, Fis family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKU3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94327.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator
L1_008_000G1_scaffold_559_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3739..5214
DNA (1476bp) protein (492aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Xaa-His dipeptidase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKU2_CLOSY
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EGA94326.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_559_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5226..6713
DNA (1488bp) protein (496aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKU1_CLOSY
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:ERI79148.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
C4-dicarboxylate anaerobic carrier
L1_008_000G1_scaffold_559_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6949..7740)
DNA (792bp) protein (264aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=4 Tax=Clostridium RepID=E7GLR3_CLOSY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GTP-sensing transcriptional pleiotropic repressor CodY
L1_008_000G1_scaffold_559_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7863..9944)
DNA (2082bp) protein (694aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKT9_CLOSY
L1_008_000G1_scaffold_559_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9954..11126)
DNA (1173bp) protein (391aa)
DNA processing protein DprA n=3 Tax=Clostridium symbiosum RepID=E7GLR1_CLOSY
DNA protecting protein DprA {ECO:0000313|EMBL:ERI79151.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DNA protecting protein DprA
L1_008_000G1_scaffold_559_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11170..12711)
DNA (1542bp) protein (514aa)
Mg chelatase n=2 Tax=Clostridium symbiosum RepID=E7GLR0_CLOSY
Mg chelatase {ECO:0000313|EMBL:EGA94321.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Mg chelatase subunit ChlI
L1_008_000G1_scaffold_559_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13207..14181)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKT6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94320.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Lysophospholipase
L1_008_000G1_scaffold_559_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14199..15533)
DNA (1335bp) protein (445aa)
MATE efflux family protein n=2 Tax=Clostridium symbiosum RepID=U2D2Y3_CLOSY
MATE efflux family protein {ECO:0000313|EMBL:ERI73901.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
MATE efflux family protein
L1_008_000G1_scaffold_559_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15721..19251)
DNA (3531bp) protein (1177aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Clostridium RepID=E9SKT4_CLOSY
L1_008_000G1_scaffold_559_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19436..21973)
DNA (2538bp) protein (846aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKT3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94317.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
diguanylate cyclase and metal dependent phosphohydrolase
L1_008_000G1_scaffold_559_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..23604)
DNA (1635bp) protein (545aa)
GH3 auxin-responsive promoter n=3 Tax=Clostridium symbiosum RepID=E7GLQ5_CLOSY
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EGA94316.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
auxin-responsive GH3 protein-like protein
L1_008_000G1_scaffold_559_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23601..24209)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SKT1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07047.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_559_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24376..26154)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GLQ3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94314.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized vancomycin resistance protein
L1_008_000G1_scaffold_559_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26358..27215
DNA (858bp) protein (286aa)
PHP domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKS9_CLOSY
PHP domain protein {ECO:0000313|EMBL:ERI73908.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted metal-dependent phosphoesterases (PHP family)
L1_008_000G1_scaffold_559_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27212..28738)
DNA (1527bp) protein (509aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKS8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07050.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_559_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28783..29676)
DNA (894bp) protein (298aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKS7_CLOSY
L1_008_000G1_scaffold_559_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29673..30248)
DNA (576bp) protein (192aa)
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) (EC:1.3.1.76 4.99.1.4)
Siroheme synthase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CXD8_CLOSY
Siroheme synthase domain protein {ECO:0000313|EMBL:ERI73912.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_000G1_scaffold_559_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30430..30687
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SKS5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94309.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_559_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30854..31090
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SKS4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73914.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_559_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31211..32332)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SKS3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94307.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted permease
L1_008_000G1_scaffold_559_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32344..33519)
DNA (1176bp) protein (392aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKS2_CLOSY
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:ERI73916.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
L1_008_000G1_scaffold_559_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34115..34753)
DNA (639bp) protein (213aa)
Precorrin isomerase (EC:5.4.1.2)
Precorrin-8X methylmutase n=3 Tax=Clostridium symbiosum RepID=E9SKS0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94304.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_559_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34750..36300)
DNA (1551bp) protein (517aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKR9_CLOSY
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_559_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36300..37397)
DNA (1098bp) protein (366aa)
Aminotransferase, class I/II n=2 Tax=Clostridium symbiosum RepID=E9SKR8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94302.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
class I and II aminotransferase
L1_008_000G1_scaffold_559_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37428..38405)
DNA (978bp) protein (326aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=4 Tax=Clostridium RepID=E7GLP0_CLOSY
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_559_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38520..38900)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SKR6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94300.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
L1_008_000G1_scaffold_559_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38941..39324)
DNA (384bp) protein (128aa)
Glyoxalase I n=2 Tax=Clostridium symbiosum RepID=E7GLN8_CLOSY
Glyoxalase I {ECO:0000313|EMBL:EGA94299.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
glyoxalase I
L1_008_000G1_scaffold_559_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39393..40160)
DNA (768bp) protein (256aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Cobalamin-5-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=3 Tax=Clostridium symbiosum RepID=E7GLN7_CLOSY
Displaying items 1-30 of 33 in total

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